refactor: update mini_swe_runner to use Hermes built-in backends

Replace all minisweagent imports with Hermes-Agent's own environment
classes (LocalEnvironment, DockerEnvironment, ModalEnvironment).

mini_swe_runner.py no longer has any dependency on mini-swe-agent.
The runner now uses the same backends as the terminal tool, so Docker
and Modal environments work out of the box without extra submodules.

Tested: local and Docker backends verified working through the runner.

mini_swe_runner.py

@@ -1,13 +1,13 @@
 #!/usr/bin/env python3
 """
-Mini-SWE-Agent Runner with Hermes Trajectory Format
+SWE Runner with Hermes Trajectory Format
 
-This module provides a runner that uses mini-swe-agent's execution environments
-(local, docker, modal) but outputs trajectories in the Hermes-Agent format
+A runner that uses Hermes-Agent's built-in execution environments
+(local, docker, modal) and outputs trajectories in the Hermes-Agent format
 compatible with batch_runner.py and trajectory_compressor.py.
 
 Features:
-- Uses mini-swe-agent's Docker, Modal, or Local environments for command execution
+- Uses Hermes-Agent's Docker, Modal, or Local environments for command execution
 - Outputs trajectories in Hermes format (from/value pairs with <tool_call>/<tool_response> XML)
 - Compatible with the trajectory compression pipeline
 - Supports batch processing from JSONL prompt files
@@ -42,13 +42,7 @@ from dotenv import load_dotenv
 # Load environment variables
 load_dotenv()
 
-# mini-swe-agent is an optional dependency for this runner.
-# Install separately: git submodule update --init mini-swe-agent && pip install -e ./mini-swe-agent
-try:
-    import minisweagent  # noqa: F401
-    _HAS_MINISWEAGENT = True
-except ImportError:
-    _HAS_MINISWEAGENT = False
+
 
 
 # ============================================================================
@@ -112,10 +106,7 @@ def create_environment(
     **kwargs
 ):
     """
-    Create an execution environment.
-
-    Uses mini-swe-agent environments when available, which requires the
-    mini-swe-agent submodule to be installed separately.
+    Create an execution environment using Hermes-Agent's built-in backends.
     
     Args:
         env_type: One of "local", "docker", "modal"
@@ -125,25 +116,19 @@ def create_environment(
         **kwargs: Additional environment-specific options
         
     Returns:
-        Environment instance with execute() method
+        Environment instance with execute() and cleanup() methods
     """
-    if not _HAS_MINISWEAGENT:
-        raise ImportError(
-            "mini-swe-agent is required for mini_swe_runner.py. "
-            "Install it: git submodule update --init mini-swe-agent && pip install -e ./mini-swe-agent"
-        )
-
     if env_type == "local":
-        from minisweagent.environments.local import LocalEnvironment
+        from tools.environments.local import LocalEnvironment
         return LocalEnvironment(cwd=cwd, timeout=timeout)
     
     elif env_type == "docker":
-        from minisweagent.environments.docker import DockerEnvironment
+        from tools.environments.docker import DockerEnvironment
         return DockerEnvironment(image=image, cwd=cwd, timeout=timeout, **kwargs)
     
     elif env_type == "modal":
-        from minisweagent.environments.extra.swerex_modal import SwerexModalEnvironment
-        return SwerexModalEnvironment(image=image, cwd=cwd, timeout=timeout, **kwargs)
+        from tools.environments.modal import ModalEnvironment
+        return ModalEnvironment(image=image, cwd=cwd, timeout=timeout, **kwargs)
     
     else:
         raise ValueError(f"Unknown environment type: {env_type}. Use 'local', 'docker', or 'modal'")
@@ -155,8 +140,8 @@ def create_environment(
 
 class MiniSWERunner:
     """
-    Agent runner that uses mini-swe-agent environments but outputs
-    trajectories in Hermes-Agent format.
+    Agent runner that uses Hermes-Agent's built-in execution environments
+    and outputs trajectories in Hermes-Agent format.
     """
     
     def __init__(
@@ -629,7 +614,7 @@ Complete the user's task step by step."""
 def main(
     task: str = None,
     prompts_file: str = None,
-    output_file: str = "mini-swe-agent-test1.jsonl",
+    output_file: str = "swe-runner-test1.jsonl",
     model: str = "claude-sonnet-4-20250514",
     base_url: str = None,
     api_key: str = None,
@@ -641,7 +626,7 @@ def main(
     verbose: bool = False,
 ):
     """
-    Run mini-swe-agent tasks with Hermes trajectory format output.
+    Run SWE tasks with Hermes trajectory format output.
     
     Args:
         task: Single task to run (use this OR prompts_file)