- Introduce a new test suite in `test_file_tools_live.py` to validate file operations and ensure accurate command execution in a real environment.
- Implement assertions to check for shell noise contamination in outputs, enhancing the reliability of command results.
- Create fixtures for setting up a local environment and populating directories with known file contents for comprehensive testing.
- Refactor shell noise handling in `process_registry.py` and `local.py` to support multiple noise patterns, improving output cleanliness.
- Introduced a shared interrupt signaling mechanism to allow tools to check for user interrupts during long-running operations.
- Updated the AIAgent to handle interrupts more effectively, ensuring in-progress tool calls are canceled and multiple interrupt messages are combined into one prompt.
- Enhanced the CLI configuration to include container resource limits (CPU, memory, disk) and persistence options for Docker, Singularity, and Modal environments.
- Improved documentation to clarify interrupt behaviors and container resource settings, providing users with better guidance on configuration and usage.
