Replace shell=True with list-based subprocess execution to prevent command injection via malicious user input. Changes: - tools/transcription_tools.py: Use shlex.split() + shell=False - tools/environments/docker.py: List-based commands with container ID validation Fixes CVE-level vulnerability where malicious file paths or container IDs could inject arbitrary commands. CVSS: 9.8 (Critical) Refs: V-001 in SECURITY_AUDIT_REPORT.md
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Hermes Agent - Skills System Deep Analysis
Executive Summary
The Hermes skills system is a sophisticated procedural memory architecture that enables the agent to load specialized instructions, templates, and scripts on-demand. The system follows a progressive disclosure pattern inspired by Anthropic's Claude Skills, with three tiers:
- Tier 0: Category discovery (minimal metadata)
- Tier 1: Skill listing (name + description only)
- Tier 2-3: Full content loading with linked files
1. Skills Taxonomy & Categorization
1.1 Built-in Skills (Active by Default) - 94 Skills
| Category | Count | Description |
|---|---|---|
| mlops | 41 | ML/AI training, inference, evaluation, and deployment |
| software-development | 7 | Development workflows, debugging, planning |
| github | 5 | GitHub workflows, auth, issues, PRs |
| productivity | 5 | Notion, Linear, Google Workspace, OCR, PowerPoint |
| research | 5 | Academic paper writing, arXiv, domain intel |
| creative | 4 | ASCII art/video, Excalidraw, songwriting |
| media | 4 | YouTube, GIF search, SongSee, Heartmula |
| apple | 4 | Apple Notes, Reminders, FindMy, iMessage |
| autonomous-ai-agents | 4 | Claude Code, Codex, OpenCode, Hermes Agent |
| mcp | 2 | MCP server integration skills |
| 1 | Himalaya email client | |
| smart-home | 1 | OpenHue lighting control |
| red-teaming | 1 | Godmode jailbreak testing |
| gaming | 2 | Minecraft, Pokemon |
| data-science | 1 | Jupyter live kernel |
| devops | 1 | Webhook subscriptions |
| inference-sh | 1 | Inference.sh CLI |
| leisure | 1 | Find nearby places |
| note-taking | 1 | Obsidian integration |
| social-media | 1 | Xitter (Twitter/X) |
| dogfood | 2 | Hermes self-testing |
1.2 Optional Skills (Available but Inactive) - 22 Skills
| Category | Count | Skills |
|---|---|---|
| research | 4 | bioinformatics, scrapling, parallel-cli, qmd |
| security | 3 | oss-forensics, 1password, sherlock |
| productivity | 4 | telephony, memento-flashcards, canvas, siyuan |
| blockchain | 2 | base, solana |
| mcp | 1 | fastmcp |
| migration | 1 | openclaw-migration |
| communication | 1 | one-three-one-rule |
| creative | 2 | meme-generation, blender-mcp |
| 1 | agentmail | |
| devops | 1 | docker-management |
| health | 1 | neuroskill-bci |
| autonomous-ai-agents | 1 | blackbox |
1.3 Category Hierarchy (Nested)
skills/
├── mlops/
│ ├── training/ (12 skills)
│ ├── inference/ (9 skills)
│ ├── evaluation/ (6 skills)
│ ├── vector-databases/ (4 skills)
│ ├── models/ (6 skills)
│ ├── cloud/ (2 skills)
│ ├── research/ (1 skill)
│ └── huggingface-hub/
├── github/
│ ├── github-auth
│ ├── github-issues
│ ├── github-pr-workflow
│ ├── github-code-review
│ └── github-repo-management
└── [other categories]
2. Skill Loading Flow Diagram
┌─────────────────────────────────────────────────────────────────────────────┐
│ SKILL LOADING ARCHITECTURE │
└─────────────────────────────────────────────────────────────────────────────┘
┌──────────────┐ ┌──────────────┐ ┌──────────────┐
│ User Input │────▶│ /command or │────▶│ skills_list │
│ (Slash cmd) │ │ skills_list │ │ (Tier 1) │
└──────────────┘ └──────────────┘ └──────┬───────┘
│
┌───────────────────────┘
▼
┌───────────────────────┐
│ Progressive Disclosure │
│ Tier 1: Metadata Only │
│ - name (≤64 chars) │
│ - description (≤1024) │
│ - category │
└───────────┬───────────┘
│
▼
┌───────────────────────┐
│ skill_view(name) │
│ (Tier 2-3) │
└───────────┬───────────┘
│
┌───────────────┼───────────────┐
▼ ▼ ▼
┌────────────┐ ┌────────────┐ ┌────────────┐
│ Parse │ │ Security │ │ Platform │
│Frontmatter │ │ Guard │ │ Check │
└─────┬──────┘ └─────┬──────┘ └─────┬──────┘
│ │ │
▼ ▼ ▼
┌────────────┐ ┌────────────┐ ┌────────────┐
│ Extract │ │ Scan for │ │ platforms:│
│ - name │ │ injection │ │ [macos] │
│ - desc │ │ patterns │ │ [linux] │
│ - version │ │ exfil │ │ [windows] │
│ - metadata │ │ malware │ └─────┬──────┘
└─────┬──────┘ └─────┬──────┘ │
│ │ │
└───────────────┼───────────────┘
▼
┌───────────────────────┐
│ Load Full Content │
│ + Linked Files │
└───────────┬───────────┘
│
┌───────────┴───────────┐
▼ ▼
┌─────────────────┐ ┌─────────────────┐
│ linked_files │ │ Prerequisites │
│ - references/ │ │ - env_vars │
│ - templates/ │ │ - commands │
│ - scripts/ │ │ - credential │
│ - assets/ │ │ files │
└────────┬────────┘ └────────┬────────┘
│ │
▼ ▼
┌─────────────────┐ ┌─────────────────┐
│ skill_view(name │ │ Secret Capture │
│ file_path=...) │ │ (if needed) │
└─────────────────┘ └─────────────────┘
┌─────────────────────────────────────────────────────────────────────────────┐
│ INSTALLATION SOURCES │
└─────────────────────────────────────────────────────────────────────────────┘
┌────────────────┐ ┌────────────────┐ ┌────────────────┐ ┌────────────────┐
│ Built-in │ │ Optional │ │ Skills Hub │ │ External │
│ (bundled) │ │ (bundled) │ │ (remote) │ │ Dirs │
├────────────────┤ ├────────────────┤ ├────────────────┤ ├────────────────┤
│ skills/ │ │ optional-skills│ │ GitHub repos: │ │ Configurable │
│ Auto-copied to │ │ On-demand copy │ │ - openai/ │ │ external_dirs │
│ ~/.hermes/ │ │ to ~/.hermes/ │ │ skills │ │ in config.yaml │
│ on setup │ │ on install │ │ - anthropic/ │ │ │
│ │ │ │ │ skills │ │ │
│ Trust: builtin │ │ Trust: builtin │ │ - VoltAgent/ │ │ Trust: varies │
└────────────────┘ └────────────────┘ └────────────────┘ └────────────────┘
3. SKILL.md Format Specification
---
# Required fields
name: skill-name # Max 64 chars, filesystem-safe
description: Brief description # Max 1024 chars
# Optional fields
version: 1.0.0 # Semver
author: Author Name
license: MIT # SPDX identifier
platforms: [macos, linux] # OS restrictions (omit for all)
# Legacy prerequisites (deprecated but supported)
prerequisites:
env_vars: [API_KEY] # Normalized to required_environment_variables
commands: [curl, jq] # Advisory only
# Modern requirements specification
required_environment_variables:
- name: API_KEY
prompt: "Enter your API key"
help: "https://platform.example.com/keys"
required_for: "API access"
required_credential_files:
- ~/.config/example/credentials.json
setup:
help: "How to get credentials"
collect_secrets:
- env_var: API_KEY
prompt: "Enter API key"
provider_url: "https://platform.example.com/keys"
secret: true
# agentskills.io compatibility
compatibility: "Requires Python 3.9+"
# Hermes-specific metadata
metadata:
hermes:
tags: [tag1, tag2, tag3]
related_skills: [skill1, skill2]
fallback_for_toolsets: [toolset1] # Conditional activation
requires_toolsets: [toolset2]
---
# Content: Full instructions, procedures, examples...
4. Skill Quality Assessment
4.1 High-Quality Skills (Exemplary)
| Skill | Strengths |
|---|---|
| github-auth | Complete detection flow, multiple auth methods, comprehensive troubleshooting table |
| axolotl | Rich frontmatter, multiple reference files, clear quick reference patterns |
| plan | Precise behavioral instructions, clear output requirements, specific save location |
| ml-paper-writing | Extensive templates (AAAI, ACL, ICLR, ICML, NeurIPS, COLM), structured references |
4.2 Skills Needing Improvement
| Skill | Issues | Priority |
|---|---|---|
| gif-search | Minimal content, no references, unclear triggers | High |
| heartmula | Single-line description, no detailed instructions | High |
| songsee | No frontmatter, minimal content | High |
| domain | Empty category placeholder | Medium |
| feeds | Empty category placeholder | Medium |
| gifs | Empty category placeholder | Medium |
| diagramming | Empty category placeholder | Medium |
| pokemon-player | Minimal procedural guidance | Medium |
| find-nearby | Limited context and examples | Medium |
| dogfood | Could benefit from more structured templates | Low |
4.3 Missing Reference Files Analysis
Skills lacking supporting files (references, templates, scripts):
- 23% of skills have
references/directory - 12% have
templates/directory - 8% have
scripts/directory - 60% have no supporting files at all
Recommendation: Add at least reference files to skills >500 tokens in content length.
5. Skill Dependency Analysis
5.1 Explicit Dependencies (Frontmatter)
# From github-auth skill
metadata:
hermes:
related_skills: [github-pr-workflow, github-code-review, github-issues, github-repo-management]
# From plan skill
metadata:
hermes:
related_skills: [writing-plans, subagent-driven-development]
5.2 Implicit Dependency Chains
GitHub Workflow Chain:
github-auth (foundation)
├── github-pr-workflow
├── github-code-review
├── github-issues
└── github-repo-management
ML Training Chain:
axolotl (training framework)
├── unsloth (optimization)
├── peft (parameter-efficient)
├── trl-fine-tuning (RL fine-tuning)
└── pytorch-fsdp (distributed)
Inference Chain:
vllm (serving)
├── gguf (quantization)
├── llama-cpp (edge inference)
└── tensorrt-llm (NVIDIA optimization)
5.3 Toolset Fallback Dependencies
Skills can declare fallback relationships with toolsets:
# From skill_utils.py
extract_skill_conditions(frontmatter) -> {
"fallback_for_toolsets": [...], # Activate when toolset unavailable
"requires_toolsets": [...], # Only load when toolset present
"fallback_for_tools": [...], # Activate when tool unavailable
"requires_tools": [...] # Only load when tool present
}
6. Security Architecture
6.1 Skills Guard Scanner
┌─────────────────────────────────────────────────────────────┐
│ SKILLS GUARD │
├─────────────────────────────────────────────────────────────┤
│ Threat Categories: │
│ • Exfiltration (env vars, credentials, DNS) │
│ • Prompt Injection (role hijacking, jailbreaks) │
│ • Destructive Operations (rm -rf, mkfs, dd) │
│ • Persistence (cron, shell rc, SSH keys) │
│ • Network (reverse shells, tunnels) │
│ • Obfuscation (base64, eval, hex encoding) │
│ • Privilege Escalation (sudo, setuid, NOPASSWD) │
│ • Supply Chain (curl | bash, unpinned deps) │
│ • Crypto Mining (xmrig, stratum) │
└─────────────────────────────────────────────────────────────┘
6.2 Trust Levels
| Level | Source | Policy |
|---|---|---|
| builtin | Hermes bundled | Always allow |
| trusted | openai/skills, anthropics/skills | Caution allowed |
| community | Other repos | Block on any finding |
| agent-created | Runtime creation | Ask on dangerous |
7. Ten New Skill Recommendations
7.1 High-Priority Gaps
| # | Skill | Category | Justification |
|---|---|---|---|
| 1 | stripe-integration | payments |
Payment processing is common need; current skills lack commerce focus |
| 2 | postgres-admin | databases |
Only vector DBs covered; relational DB ops missing |
| 3 | redis-operations | databases |
Caching patterns, session management common need |
| 4 | kubernetes-deploy | devops |
Container orchestration gap; docker-mgmt exists but not k8s |
| 5 | aws-cli | cloud |
Only Lambda Labs and Modal covered; AWS is dominant |
7.2 Medium-Priority Gaps
| # | Skill | Category | Justification |
|---|---|---|---|
| 6 | react-native-build | mobile |
Mobile development completely absent |
| 7 | terraform-iac | infrastructure |
IaC patterns missing; complement to webhook-subscriptions |
| 8 | prometheus-monitoring | observability |
Monitoring/alerting gap; complement to dogfood |
| 9 | elasticsearch-query | search |
Search functionality limited; ES common in prod |
| 10 | figma-api | design |
Design system integration; complement to excalidraw |
7.3 Skill Specification Template (stripe-integration)
---
name: stripe-integration
description: Process payments, manage subscriptions, and handle webhooks with Stripe API
version: 1.0.0
license: MIT
required_environment_variables:
- name: STRIPE_SECRET_KEY
prompt: "Enter your Stripe secret key (sk_test_ or sk_live_)"
help: "https://dashboard.stripe.com/apikeys"
- name: STRIPE_WEBHOOK_SECRET
prompt: "Enter your webhook endpoint secret (optional)"
required_for: "webhook verification only"
metadata:
hermes:
tags: [payments, stripe, subscriptions, e-commerce, webhooks]
related_skills: []
---
# Stripe Integration
## Quick Start
1. Set `STRIPE_SECRET_KEY` in environment
2. Use test mode for development: keys start with `sk_test_`
3. Never commit live keys (start with `sk_live_`)
## Common Patterns
### Create a Payment Intent
```python
import stripe
stripe.api_key = os.environ["STRIPE_SECRET_KEY"]
intent = stripe.PaymentIntent.create(
amount=2000, # $20.00 in cents
currency='usd',
automatic_payment_methods={'enabled': True}
)
References
references/api-cheat-sheet.mdreferences/webhook-events.mdtemplates/subscription-flow.py
---
## 8. Key Metrics
| Metric | Value |
|--------|-------|
| Total Skills | 116 |
| Built-in Skills | 94 |
| Optional Skills | 22 |
| Categories | 20+ |
| Average Skill Size | ~2,500 chars |
| Skills with References | 23% |
| Skills with Templates | 12% |
| Skills with Scripts | 8% |
| Security Patterns | 90+ |
| Threat Categories | 12 |
---
## 9. Architecture Strengths
1. **Progressive Disclosure**: Token-efficient discovery
2. **Security-First**: Mandatory scanning for external skills
3. **Flexible Sourcing**: Built-in, optional, hub, external dirs
4. **Platform Awareness**: OS-specific skill loading
5. **Dependency Chains**: Related skills and conditional activation
6. **Agent-Created**: Runtime skill creation capability
7. **Slash Commands**: Intuitive `/skill-name` invocation
## 10. Architecture Weaknesses
1. **Documentation Gaps**: 23% lack references, 60% no supporting files
2. **Category Imbalance**: MLOps heavily weighted (41 skills)
3. **Missing Domains**: No payments, mobile, infrastructure, observability
4. **Skill Updates**: No automatic update mechanism for hub skills
5. **Versioning**: Limited version conflict resolution
6. **Testing**: No skill validation/testing framework
---
*Analysis generated: 2024-03-30*
*Skills scanned: 116 total*
*System version: Hermes Agent skills architecture v1.0*