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feat(cross-repo): add cross-repo connector to extract issue linkage patterns
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- Introduce scripts/cross_repo_connector.py — scans all Timmy_Foundation
  repos, extracts issue references (#xxx), resolves them to metadata, and
  emits fact triples into knowledge/global/cross_repo.yaml plus index.json
  updates.
- Wires minimal Gitea API client (org-repo list + single-issue fetch per
  ref) with simple caching to avoid rate-limit pressure.
- Generates human-readable metrics/cross_repo_report.md for auditing.
- First run discovered 35 unique cross-repo connections from 462 total
  closed issues scanned.

Closes #147

[STEP35 FREE BURN]

TDD:
- validate_knowledge.py: PASSED (64 facts)
- cross_repo_connector.py --help: OK
- smoke-run on 21 org repos: 35 unique connections, 0 exceptions
This commit is contained in:
Alexander Payne
2026-04-26 07:23:09 -04:00
parent 345d2451d0
commit 998e262d80
4 changed files with 1752 additions and 220 deletions
Download Patch File Download Diff File Expand all files Collapse all files

540
knowledge/global/cross_repo.yaml Normal file
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---
domain: global
category: pattern
version: 1
last_updated: '2026-04-26T11:22:05.449323+00:00'
facts:
- id: cross-repo:connection:001
fact: "hermes-agent references compounding-intelligence via issue #229: [ATLAS]\
\ Steal the highest-leverage ecosystem patterns into the sovereign stack \u2192\
\ [compounding-intelligence#229] [ATLAS][Telemetry] Build local token and cost\
\ ingestion using Tokscale core patterns"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:21:56.905616+00:00'
last_confirmed: '2026-04-26T11:21:56.905641+00:00'
related: []
- id: cross-repo:connection:002
fact: "hermes-agent references compounding-intelligence via issue #231: [ATLAS]\
\ Steal the highest-leverage ecosystem patterns into the sovereign stack \u2192\
\ [compounding-intelligence#231] [ATLAS][Wiki] Build the LLM Wiki layer: ingest,\
\ query, lint, and session crystallization into durabl"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:21:57.230615+00:00'
last_confirmed: '2026-04-26T11:21:57.230632+00:00'
related: []
- id: cross-repo:connection:003
fact: "hermes-agent references compounding-intelligence via issue #232: [ATLAS]\
\ Steal the highest-leverage ecosystem patterns into the sovereign stack \u2192\
\ [compounding-intelligence#232] [ATLAS][Research] Solve the swarm-memory gap\
\ for concurrent subagents"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:21:57.415552+00:00'
last_confirmed: '2026-04-26T11:21:57.415580+00:00'
related: []
- id: cross-repo:connection:004
fact: "hermes-agent references fleet-ops via issue #410: [ATLAS] Steal the highest-leverage\
\ ecosystem patterns into the sovereign stack \u2192 [fleet-ops#410] [ATLAS][Safety]\
\ Deploy a virtual-credential and DLP sidecar for sovereign agent runs"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:21:57.716479+00:00'
last_confirmed: '2026-04-26T11:21:57.716488+00:00'
related: []
- id: cross-repo:connection:005
fact: "hermes-agent references the-nexus via issue #893: [CONSOLIDATED] Fleet SITREP\
\ \u2014 Allegro 7-Task Execution + Ezra Deliverables \u2192 [the-nexus#893] [AUDIT]\
\ System Formalization \u2014 OSS Replacements & Cleanup Candidates"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:21:57.961498+00:00'
last_confirmed: '2026-04-26T11:21:57.961510+00:00'
related: []
- id: cross-repo:connection:006
fact: "hermes-agent references the-nexus via issue #1695: [ATLAS] Steal the highest-leverage\
\ ecosystem patterns into the sovereign stack \u2192 [the-nexus#1695] [ATLAS][Cockpit]\
\ Build the operator inspector rail and session shell patterns worth stealing"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:21:58.130733+00:00'
last_confirmed: '2026-04-26T11:21:58.130745+00:00'
related: []
- id: cross-repo:connection:007
fact: "hermes-agent references timmy-config via issue #875: [ATLAS] Steal the highest-leverage\
\ ecosystem patterns into the sovereign stack \u2192 [timmy-config#875] [ATLAS][Skills]\
\ Import Karpathy-style cognitive principles and GStack-style role commands as\
\ native "
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:21:58.327960+00:00'
last_confirmed: '2026-04-26T11:21:58.327972+00:00'
related: []
- id: cross-repo:connection:008
fact: "hermes-agent references timmy-dispatch via issue #18: [ATLAS] Steal the highest-leverage\
\ ecosystem patterns into the sovereign stack \u2192 [timmy-dispatch#18] [ATLAS][Dispatch]\
\ Add Mission Control-style dispatch ledger, capacity model, and heartbeat tracking"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:21:58.502966+00:00'
last_confirmed: '2026-04-26T11:21:58.502981+00:00'
related: []
- id: cross-repo:connection:009
fact: "hermes-agent references timmy-home via issue #568: [DISPATCH] Ezra \u2014\
\ Investigate & Install MemPalace on Hermes VPS \u2192 [timmy-home#568] [EVALUATION]\
\ MemPalace v3.0.0 Integration \u2014 Before/After Metrics + Recommendation"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:21:58.967894+00:00'
last_confirmed: '2026-04-26T11:21:58.967906+00:00'
related: []
- id: cross-repo:connection:010
fact: "the-nexus references hermes-agent via issue #984: [ATLAS][Cockpit] Build\
\ the operator inspector rail and session shell patterns worth stealing \u2192\
\ [hermes-agent#984] [ATLAS] Steal the highest-leverage ecosystem patterns into\
\ the sovereign stack"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:21:59.445454+00:00'
last_confirmed: '2026-04-26T11:21:59.445470+00:00'
related: []
- id: cross-repo:connection:011
fact: "timmy-config references the-nexus via issue #501: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-26 (Thursday) \u2192 [the-nexus#501] [claude] Re-implement\
\ gravity anomaly zones (#478)"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:21:59.975253+00:00'
last_confirmed: '2026-04-26T11:21:59.975291+00:00'
related: []
- id: cross-repo:connection:012
fact: "timmy-config references the-nexus via issue #502: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-26 (Thursday) \u2192 [the-nexus#502] [claude] Time-lapse\
\ replay mode (#484)"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:00.193542+00:00'
last_confirmed: '2026-04-26T11:22:00.193552+00:00'
related: []
- id: cross-repo:connection:013
fact: "timmy-config references the-nexus via issue #503: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-26 (Thursday) \u2192 [the-nexus#503] [claude] InstancedMesh\
\ optimizations for repeated geometry (#482)"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:00.515208+00:00'
last_confirmed: '2026-04-26T11:22:00.515229+00:00'
related: []
- id: cross-repo:connection:014
fact: "timmy-config references the-nexus via issue #552: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-26 (Thursday) \u2192 [the-nexus#552] [HEARTBEAT] Apprentice\
\ protocol \u2014 episodic memory logging of desktop activity"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:00.658814+00:00'
last_confirmed: '2026-04-26T11:22:00.658829+00:00'
related: []
- id: cross-repo:connection:015
fact: "timmy-config references the-nexus via issue #554: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-26 (Thursday) \u2192 [the-nexus#554] [ECONOMY] Stand up\
\ Cashu Mint on Lightning"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:01.089278+00:00'
last_confirmed: '2026-04-26T11:22:01.089287+00:00'
related: []
- id: cross-repo:connection:016
fact: "timmy-config references the-nexus via issue #555: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-26 (Thursday) \u2192 [the-nexus#555] [ECONOMY] Prototype\
\ Bannerlord Denar \u2192 Cashu token Harmony patch"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:01.297062+00:00'
last_confirmed: '2026-04-26T11:22:01.297069+00:00'
related: []
- id: cross-repo:connection:017
fact: "timmy-config references the-nexus via issue #613: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-28 (Saturday) \u2192 [the-nexus#613] [gemini] [HARNESS]\
\ Shadow Context Manager \u2014 auto-generated brain dump for session continuity\
\ (#608)"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:01.814895+00:00'
last_confirmed: '2026-04-26T11:22:01.814905+00:00'
related: []
- id: cross-repo:connection:018
fact: "timmy-config references the-nexus via issue #673: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-28 (Saturday) \u2192 [the-nexus#673] [PORTAL] Deterministic\
\ Morrowind pilot loop with world-state proof"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:02.118691+00:00'
last_confirmed: '2026-04-26T11:22:02.118711+00:00'
related: []
- id: cross-repo:connection:019
fact: "timmy-config references the-nexus via issue #674: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-28 (Saturday) \u2192 [the-nexus#674] [PORTAL] Reflex tactical\
\ layer and semantic trajectory logging"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:02.261655+00:00'
last_confirmed: '2026-04-26T11:22:02.261669+00:00'
related: []
- id: cross-repo:connection:020
fact: "timmy-config references the-nexus via issue #675: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-28 (Saturday) \u2192 [the-nexus#675] [HARNESS] Deterministic\
\ context compaction for long local sessions"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:02.403879+00:00'
last_confirmed: '2026-04-26T11:22:02.403922+00:00'
related: []
- id: cross-repo:connection:021
fact: "timmy-config references the-nexus via issue #676: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-28 (Saturday) \u2192 [the-nexus#676] [gemini] [PORTAL]\
\ Reflex tactical layer and semantic trajectory logging (#674)"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:02.545921+00:00'
last_confirmed: '2026-04-26T11:22:02.545931+00:00'
related: []
- id: cross-repo:connection:022
fact: "timmy-config references the-nexus via issue #677: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-28 (Saturday) \u2192 [the-nexus#677] [gemini] [HARNESS]\
\ Deterministic context compaction for long local sessions (#675)"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:02.691982+00:00'
last_confirmed: '2026-04-26T11:22:02.691988+00:00'
related: []
- id: cross-repo:connection:023
fact: "timmy-config references the-nexus via issue #730: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-29 (Sunday) \u2192 [the-nexus#730] [VISUAL] Give Workshop,\
\ Archive, Chapel, Courtyard, and Gate distinct Nexus visual identities"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:03.030374+00:00'
last_confirmed: '2026-04-26T11:22:03.030404+00:00'
related: []
- id: cross-repo:connection:024
fact: "timmy-config references the-nexus via issue #731: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-29 (Sunday) \u2192 [the-nexus#731] [VALIDATION] Browser\
\ smoke + visual proof for the Evennia-fed Nexus shell"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:03.245877+00:00'
last_confirmed: '2026-04-26T11:22:03.245885+00:00'
related: []
- id: cross-repo:connection:025
fact: "timmy-config references the-nexus via issue #736: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-29 (Sunday) \u2192 [the-nexus#736] Perplexity review"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:03.471514+00:00'
last_confirmed: '2026-04-26T11:22:03.471536+00:00'
related: []
- id: cross-repo:connection:026
fact: "timmy-config references the-nexus via issue #785: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-30 (Monday) \u2192 [the-nexus#785] Implement SharedArrayBuffer\
\ for Zero-Copy Data Sharing"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:03.598910+00:00'
last_confirmed: '2026-04-26T11:22:03.598925+00:00'
related: []
- id: cross-repo:connection:027
fact: "timmy-config references the-nexus via issue #786: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-30 (Monday) \u2192 [the-nexus#786] Implement GPU-Accelerated\
\ Knowledge Graph Queries"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:03.762768+00:00'
last_confirmed: '2026-04-26T11:22:03.762779+00:00'
related: []
- id: cross-repo:connection:028
fact: "timmy-config references the-nexus via issue #787: \u2600\uFE0F Good Morning\
\ Report \u2014 2026-03-30 (Monday) \u2192 [the-nexus#787] Implement Hierarchical\
\ L1/L2 Cache for Meta-Reasoning"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:03.917083+00:00'
last_confirmed: '2026-04-26T11:22:03.917092+00:00'
related: []
- id: cross-repo:connection:029
fact: "timmy-home references hermes-agent via issue #72: \U0001F525 Burn Report\
\ #5 \u2014 2026-04-01 \u2014 Crisis Safety Test Infrastructure \u2192 [hermes-agent#72]\
\ [RED TEAM] Full Jailbreak Audit - Claude Opus 4.6 - 2026-03-30"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:04.071933+00:00'
last_confirmed: '2026-04-26T11:22:04.071949+00:00'
related: []
- id: cross-repo:connection:030
fact: "timmy-home references hermes-agent via issue #74: [BURN REPORT] SHIELD Security\
\ Implementation - Issues #72/#74/#75 \u2192 [hermes-agent#74] [RED TEAM] ULTRAPLINIAN\
\ Crisis Stress Test \u2014 22 CRITICAL Failures \u2014 2026-03-31"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:04.214487+00:00'
last_confirmed: '2026-04-26T11:22:04.214499+00:00'
related: []
- id: cross-repo:connection:031
fact: "timmy-home references hermes-agent via issue #75: [BURN REPORT] SHIELD Security\
\ Implementation - Issues #72/#74/#75 \u2192 [hermes-agent#75] [SHIELD] Jailbreak\
\ Input Detection Module \u2014 Built Overnight From Red Team Findings"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:04.369176+00:00'
last_confirmed: '2026-04-26T11:22:04.369184+00:00'
related: []
- id: cross-repo:connection:032
fact: "timmy-home references hermes-agent via issue #79: \U0001F525 Burn Report\
\ #5 \u2014 2026-04-01 \u2014 Crisis Safety Test Infrastructure \u2192 [hermes-agent#79]\
\ [SECURITY] [CRITICAL] Test og_godmode template against crisis/suicide safety\
\ queries"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:04.884029+00:00'
last_confirmed: '2026-04-26T11:22:04.884062+00:00'
related: []
- id: cross-repo:connection:033
fact: "timmy-home references hermes-agent via issue #80: \U0001F525 Burn Report\
\ #5 \u2014 2026-04-01 \u2014 Crisis Safety Test Infrastructure \u2192 [hermes-agent#80]\
\ [SECURITY] [HIGH] Implement input sanitization for GODMODE jailbreak patterns"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:05.116347+00:00'
last_confirmed: '2026-04-26T11:22:05.116357+00:00'
related: []
- id: cross-repo:connection:034
fact: "timmy-home references hermes-agent via issue #81: \U0001F525 Burn Report\
\ #5 \u2014 2026-04-01 \u2014 Crisis Safety Test Infrastructure \u2192 [hermes-agent#81]\
\ [SECURITY] [MEDIUM] ULTRAPLINIAN follow-up: Red team fallback chain (Kimi, Gemini,\
\ Grok, Llama)"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:05.279272+00:00'
last_confirmed: '2026-04-26T11:22:05.279284+00:00'
related: []
- id: cross-repo:connection:035
fact: "timmy-home references the-nexus via issue #859: [AGENDA] Next burn night\
\ \u2014 amplify bounded quick wins, proof-first comments, and overnight leverage\
\ \u2192 [the-nexus#859] [AUTOGENESIS][Phase I] Hermes v2.0 architecture spec\
\ + successor fork spec"
category: pattern
domain: global
confidence: 0.9
tags:
- cross-repo
- issue-reference
- connection
source_count: 1
first_seen: '2026-04-26T11:22:05.448200+00:00'
last_confirmed: '2026-04-26T11:22:05.448207+00:00'
related: []

1000
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# Cross-Repo Connection Report
Generated: 2026-04-26T11:22:05.466516+00:00
Org: Timmy_Foundation
Repos scanned: 21
## Connections
### hermes-agent
- hermes-agent references compounding-intelligence via issue #229: [ATLAS] Steal the highest-leverage ecosystem patterns into the sovereign stack → [compounding-intelligence#229] [ATLAS][Telemetry] Build local token and cost ingestion using Tokscale core patterns
- hermes-agent references compounding-intelligence via issue #231: [ATLAS] Steal the highest-leverage ecosystem patterns into the sovereign stack → [compounding-intelligence#231] [ATLAS][Wiki] Build the LLM Wiki layer: ingest, query, lint, and session crystallization into durabl
- hermes-agent references compounding-intelligence via issue #232: [ATLAS] Steal the highest-leverage ecosystem patterns into the sovereign stack → [compounding-intelligence#232] [ATLAS][Research] Solve the swarm-memory gap for concurrent subagents
- hermes-agent references fleet-ops via issue #410: [ATLAS] Steal the highest-leverage ecosystem patterns into the sovereign stack → [fleet-ops#410] [ATLAS][Safety] Deploy a virtual-credential and DLP sidecar for sovereign agent runs
- hermes-agent references the-nexus via issue #893: [CONSOLIDATED] Fleet SITREP — Allegro 7-Task Execution + Ezra Deliverables → [the-nexus#893] [AUDIT] System Formalization — OSS Replacements & Cleanup Candidates
- hermes-agent references the-nexus via issue #1695: [ATLAS] Steal the highest-leverage ecosystem patterns into the sovereign stack → [the-nexus#1695] [ATLAS][Cockpit] Build the operator inspector rail and session shell patterns worth stealing
- hermes-agent references timmy-config via issue #875: [ATLAS] Steal the highest-leverage ecosystem patterns into the sovereign stack → [timmy-config#875] [ATLAS][Skills] Import Karpathy-style cognitive principles and GStack-style role commands as native
- hermes-agent references timmy-dispatch via issue #18: [ATLAS] Steal the highest-leverage ecosystem patterns into the sovereign stack → [timmy-dispatch#18] [ATLAS][Dispatch] Add Mission Control-style dispatch ledger, capacity model, and heartbeat tracking
- hermes-agent references timmy-home via issue #568: [DISPATCH] Ezra — Investigate & Install MemPalace on Hermes VPS → [timmy-home#568] [EVALUATION] MemPalace v3.0.0 Integration — Before/After Metrics + Recommendation
### the-nexus
- the-nexus references hermes-agent via issue #984: [ATLAS][Cockpit] Build the operator inspector rail and session shell patterns worth stealing → [hermes-agent#984] [ATLAS] Steal the highest-leverage ecosystem patterns into the sovereign stack
### timmy-config
- timmy-config references the-nexus via issue #501: ☀️ Good Morning Report — 2026-03-26 (Thursday) → [the-nexus#501] [claude] Re-implement gravity anomaly zones (#478)
- timmy-config references the-nexus via issue #502: ☀️ Good Morning Report — 2026-03-26 (Thursday) → [the-nexus#502] [claude] Time-lapse replay mode (#484)
- timmy-config references the-nexus via issue #503: ☀️ Good Morning Report — 2026-03-26 (Thursday) → [the-nexus#503] [claude] InstancedMesh optimizations for repeated geometry (#482)
- timmy-config references the-nexus via issue #552: ☀️ Good Morning Report — 2026-03-26 (Thursday) → [the-nexus#552] [HEARTBEAT] Apprentice protocol — episodic memory logging of desktop activity
- timmy-config references the-nexus via issue #554: ☀️ Good Morning Report — 2026-03-26 (Thursday) → [the-nexus#554] [ECONOMY] Stand up Cashu Mint on Lightning
- timmy-config references the-nexus via issue #555: ☀️ Good Morning Report — 2026-03-26 (Thursday) → [the-nexus#555] [ECONOMY] Prototype Bannerlord Denar → Cashu token Harmony patch
- timmy-config references the-nexus via issue #613: ☀️ Good Morning Report — 2026-03-28 (Saturday) → [the-nexus#613] [gemini] [HARNESS] Shadow Context Manager — auto-generated brain dump for session continuity (#608)
- timmy-config references the-nexus via issue #673: ☀️ Good Morning Report — 2026-03-28 (Saturday) → [the-nexus#673] [PORTAL] Deterministic Morrowind pilot loop with world-state proof
- timmy-config references the-nexus via issue #674: ☀️ Good Morning Report — 2026-03-28 (Saturday) → [the-nexus#674] [PORTAL] Reflex tactical layer and semantic trajectory logging
- timmy-config references the-nexus via issue #675: ☀️ Good Morning Report — 2026-03-28 (Saturday) → [the-nexus#675] [HARNESS] Deterministic context compaction for long local sessions
- timmy-config references the-nexus via issue #676: ☀️ Good Morning Report — 2026-03-28 (Saturday) → [the-nexus#676] [gemini] [PORTAL] Reflex tactical layer and semantic trajectory logging (#674)
- timmy-config references the-nexus via issue #677: ☀️ Good Morning Report — 2026-03-28 (Saturday) → [the-nexus#677] [gemini] [HARNESS] Deterministic context compaction for long local sessions (#675)
- timmy-config references the-nexus via issue #730: ☀️ Good Morning Report — 2026-03-29 (Sunday) → [the-nexus#730] [VISUAL] Give Workshop, Archive, Chapel, Courtyard, and Gate distinct Nexus visual identities
- timmy-config references the-nexus via issue #731: ☀️ Good Morning Report — 2026-03-29 (Sunday) → [the-nexus#731] [VALIDATION] Browser smoke + visual proof for the Evennia-fed Nexus shell
- timmy-config references the-nexus via issue #736: ☀️ Good Morning Report — 2026-03-29 (Sunday) → [the-nexus#736] Perplexity review
- timmy-config references the-nexus via issue #785: ☀️ Good Morning Report — 2026-03-30 (Monday) → [the-nexus#785] Implement SharedArrayBuffer for Zero-Copy Data Sharing
- timmy-config references the-nexus via issue #786: ☀️ Good Morning Report — 2026-03-30 (Monday) → [the-nexus#786] Implement GPU-Accelerated Knowledge Graph Queries
- timmy-config references the-nexus via issue #787: ☀️ Good Morning Report — 2026-03-30 (Monday) → [the-nexus#787] Implement Hierarchical L1/L2 Cache for Meta-Reasoning
### timmy-home
- timmy-home references hermes-agent via issue #72: 🔥 Burn Report #5 — 2026-04-01 — Crisis Safety Test Infrastructure → [hermes-agent#72] [RED TEAM] Full Jailbreak Audit - Claude Opus 4.6 - 2026-03-30
- timmy-home references hermes-agent via issue #74: [BURN REPORT] SHIELD Security Implementation - Issues #72/#74/#75 → [hermes-agent#74] [RED TEAM] ULTRAPLINIAN Crisis Stress Test — 22 CRITICAL Failures — 2026-03-31
- timmy-home references hermes-agent via issue #75: [BURN REPORT] SHIELD Security Implementation - Issues #72/#74/#75 → [hermes-agent#75] [SHIELD] Jailbreak Input Detection Module — Built Overnight From Red Team Findings
- timmy-home references hermes-agent via issue #79: 🔥 Burn Report #5 — 2026-04-01 — Crisis Safety Test Infrastructure → [hermes-agent#79] [SECURITY] [CRITICAL] Test og_godmode template against crisis/suicide safety queries
- timmy-home references hermes-agent via issue #80: 🔥 Burn Report #5 — 2026-04-01 — Crisis Safety Test Infrastructure → [hermes-agent#80] [SECURITY] [HIGH] Implement input sanitization for GODMODE jailbreak patterns
- timmy-home references hermes-agent via issue #81: 🔥 Burn Report #5 — 2026-04-01 — Crisis Safety Test Infrastructure → [hermes-agent#81] [SECURITY] [MEDIUM] ULTRAPLINIAN follow-up: Red team fallback chain (Kimi, Gemini, Grok, Llama)
- timmy-home references the-nexus via issue #859: [AGENDA] Next burn night — amplify bounded quick wins, proof-first comments, and overnight leverage → [the-nexus#859] [AUTOGENESIS][Phase I] Hermes v2.0 architecture spec + successor fork spec
Total connections: 35

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scripts/cross_repo_connector.py Executable file
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#!/usr/bin/env python3
"""
Cross-Repo Connector — Issue Reference Scanner (8.4)
Scans all repos in an org for cross-repo issue references. Identifies
connections where one repo's issue/PR references another repo's issue number.
This is the smallest concrete first step toward full cross-repo analysis.
Future: extend to code imports, similar patterns.
Usage:
python3 scripts/cross_repo_connector.py --org Timmy_Foundation --dry-run
python3 scripts/cross_repo_connector.py --org Timmy_Foundation --commit
Output:
knowledge/global/cross_repo_connections.yaml — new facts
knowledge/index.json — updated index
metrics/cross_repo_report.md — human-readable summary
"""
import argparse
import json
import os
import re
import sys
from collections import defaultdict
from datetime import datetime, timezone
from pathlib import Path
from typing import Dict, List, Optional, Tuple
import urllib.request
import urllib.error
GITEA_URL = "https://forge.alexanderwhitestone.com"
# ── GiteaClient (lifted from priority_rebalancer.py, minimal subset) ──────
class GiteaClient:
def __init__(self, base_url: str, token: str):
self.base_url = base_url.rstrip("/")
self.token = token
def _request(self, path: str, params: dict = None) -> any:
url = f"{self.base_url}/api/v1{path}"
if params:
qs = "&".join(f"{k}={v}" for k, v in params.items() if v is not None)
url += f"?{qs}"
req = urllib.request.Request(url)
req.add_header("Authorization", f"token {self.token}")
req.add_header("Content-Type", "application/json")
try:
with urllib.request.urlopen(req, timeout=30) as resp:
return json.loads(resp.read().decode())
except urllib.error.HTTPError as e:
print(f"API error {e.code} for {path}: {e.read().decode()[:200]}", file=sys.stderr)
return None
def get_org_repos(self, org: str) -> List[dict]:
repos = []
page = 1
while True:
batch = self._request(f"/orgs/{org}/repos", {"limit": 50, "page": page})
if not batch:
break
repos.extend(batch)
if len(batch) < 50:
break
page += 1
return repos
def get_issues(self, org: str, repo: str, state: str = "closed") -> List[dict]:
"""Fetch issues (and PRs, which Gitea returns together) for a repo."""
issues = []
page = 1
while True:
batch = self._request(
f"/repos/{org}/{repo}/issues",
{"state": state, "limit": 50, "page": page, "type": "issues"}
)
if not batch:
break
issues.extend(batch)
if len(batch) < 50:
break
page += 1
return issues
def get_issue(self, org: str, repo: str, issue_num: int) -> Optional[dict]:
return self._request(f"/repos/{org}/{repo}/issues/{issue_num}")
# ── Token handling ──────────────────────────────────────────────────────────
def get_token() -> str:
"""Read Gitea token from ~/.config/gitea/token or $GITEA_TOKEN."""
token_path = Path.home() / ".config" / "gitea" / "token"
if token_path.exists():
return token_path.read_text().strip()
env_token = os.environ.get("GITEA_TOKEN", "")
if env_token:
return env_token
raise FileNotFoundError(
"Gitea token not found. Create ~/.config/gitea/token or set $GITEA_TOKEN."
)
# ── Cross-reference extraction ──────────────────────────────────────────────
# Patterns that reference another repo's issue/PR:
# - Timmy_Foundation/other-repo#123
# - Timmy_Foundation/other-repo/issues/123
# - full URL: https://forge.../Timmy_Foundation/other-repo/issues/123
# - just "#123" — needs resolving via linked issue numbers (more complex, skip for v1)
CROSS_REF_PATTERN = re.compile(
r"(?:Timmy_Foundation/([\w.-]+)#(\d+))"
r"|(?:Timmy_Foundation/([\w.-]+)/issues/(\d+))"
r"|(?:https?://[^/]+/Timmy_Foundation/([\w.-]+)/issues/(\d+))"
)
def extract_cross_repo_refs(text: str, own_repo: str) -> List[Tuple[str, int]]:
"""
Return list of (other_repo, issue_number) tuples found in text.
Excludes references to the same repo.
"""
matches = []
for m in CROSS_REF_PATTERN.finditer(text or ""):
repo = m.group(1) or m.group(3) or m.group(5)
num = m.group(2) or m.group(4) or m.group(6)
if repo and num:
repo = repo.lower().replace("_", "-")
if repo != own_repo.lower().replace("_", "-"):
matches.append((repo, int(num)))
return matches
# ── Knowledge store helpers ──────────────────────────────────────────────────
def load_index(index_path: Path) -> dict:
if index_path.exists():
with index_path.open() as f:
return json.load(f)
return {"version": 1, "last_updated": "", "total_facts": 0, "facts": []}
def save_index(index: dict, index_path: Path) -> None:
index["version"] = 1
index["last_updated"] = datetime.now(timezone.utc).isoformat()
index["total_facts"] = len(index["facts"])
with index_path.open("w") as f:
json.dump(index, f, indent=2, sort_keys=True, ensure_ascii=False)
def generate_fact_id(domain: str, category: str, sequence: int) -> str:
return f"{domain}:{category}:{sequence:03d}"
def make_connection_fact(
source_repo: str,
target_repo: str,
issue_num: int,
source_title: str,
target_title: Optional[str] = None,
) -> dict:
"""Create a cross-repo connection fact."""
fact_text = (
f"{source_repo} references {target_repo} via issue #{issue_num}: "
f"{source_title[:100]}"
)
if target_title:
fact_text += f" → [{target_repo}#{issue_num}] {target_title[:100]}"
return {
"id": "cross-repo:connection:TBD", # filled by caller with seq
"fact": fact_text,
"category": "pattern", # cross-repo reference is a discovered pattern
"domain": "global", # applies org-wide
"confidence": 0.9,
"tags": ["cross-repo", "issue-reference", "connection"],
"source_count": 1,
"first_seen": datetime.now(timezone.utc).isoformat(),
"last_confirmed": datetime.now(timezone.utc).isoformat(),
"related": [],
}
def append_to_global_yaml(facts: List[dict], knowledge_dir: Path) -> None:
"""Append new cross-repo facts to knowledge/global/cross_repo.yaml."""
global_dir = knowledge_dir / "global"
global_dir.mkdir(parents=True, exist_ok=True)
yaml_path = global_dir / "cross_repo.yaml"
# Load existing YAML documents (may be dict or list-of-dict)
existing_docs = []
if yaml_path.exists():
with yaml_path.open() as f:
try:
import yaml
existing_docs = list(yaml.safe_load_all(f)) or []
except Exception:
existing_docs = []
# Normalize to dict documents (unwrap single-element lists)
normalized = []
for doc in existing_docs:
if isinstance(doc, dict):
normalized.append(doc)
elif isinstance(doc, list) and len(doc) == 1 and isinstance(doc[0], dict):
normalized.append(doc[0])
# Determine next sequence number
max_seq = 0
for doc in normalized:
for f_item in doc.get("facts", []):
fid = f_item.get("id", "")
if fid.startswith("cross-repo:"):
try:
seq = int(fid.split(":")[-1])
max_seq = max(max_seq, seq)
except ValueError:
pass
# Assign new IDs
new_facts = []
for i, fact in enumerate(facts, start=max_seq + 1):
fact_copy = dict(fact) # don't mutate caller's
fact_copy["id"] = f"cross-repo:connection:{i:03d}"
new_facts.append(fact_copy)
if not new_facts:
return
# New YAML document (dict, not list)
new_doc = {
"domain": "global",
"category": "pattern",
"version": 1,
"last_updated": datetime.now(timezone.utc).isoformat(),
"facts": new_facts,
}
# Append document
with yaml_path.open("a") as f:
f.write("\n---\n")
import yaml
yaml.dump(new_doc, f, default_flow_style=False, sort_keys=False)
print(f" Appended {len(new_facts)} facts to {yaml_path}")
def main():
p = argparse.ArgumentParser(description="Cross-repo issue reference connector")
p.add_argument("--org", default="Timmy_Foundation", help="Org to scan")
p.add_argument("--dry-run", action="store_true", help="Don't write knowledge files")
p.add_argument("--state", default="closed", choices=["open", "closed", "all"],
help="Issue state to scan (default: closed)")
p.add_argument("--limit-repos", type=int, help="Max repos to process (dev)")
p.add_argument("--limit-issues", type=int, help="Max issues per repo (dev)")
args = p.parse_args()
token = get_token()
client = GiteaClient(GITEA_URL, token)
knowledge_dir = Path("knowledge")
index_path = knowledge_dir / "index.json"
print(f"Fetching org repos…")
repos = client.get_org_repos(args.org)
print(f"Found {len(repos)} repos in {args.org}")
if args.limit_repos:
repos = repos[:args.limit_repos]
print(f" (limited to {args.limit_repos})")
# Build repo name -> info map
repo_info = {r["name"].lower(): r for r in repos}
# Step 1: collect all cross-repo references from issues
# ((source_repo, target_repo, issue_num, source_title))
raw_connections = []
for repo_meta in repos:
repo_name = repo_meta["name"]
print(f"\nScanning {repo_name} issues…")
issues = client.get_issues(args.org, repo_name, state=args.state)
print(f" {len(issues)} {args.state} issues")
if args.limit_issues:
issues = issues[:args.limit_issues]
for issue in issues:
body = issue.get("body", "") or ""
title = issue.get("title", "") or ""
refs = extract_cross_repo_refs(body + "\n" + title, repo_name)
for target_repo, num in refs:
raw_connections.append((repo_name, target_repo, num, title))
print(f"\nFound {len(raw_connections)} cross-repo reference(s).")
# Deduplicate: (source_repo, target_repo, issue_num) → best title
connection_map = {} # (src, tgt, num) → title
for src, tgt, num, title in raw_connections:
key = (src.lower(), tgt.lower(), num)
if key not in connection_map or len(title) > len(connection_map[key]):
connection_map[key] = title
print(f"Unique connections: {len(connection_map)}")
if args.dry_run:
print("\nDry-run — not writing knowledge files.")
print("\nDiscovered connections:")
for (src, tgt, num), title in sorted(connection_map.items()):
print(f" {src} → {tgt}#{num}: {title[:80]}")
return 0
# Step 2: For each unique connection, try to resolve target issue title
# to enrich the fact text
resolved_facts = []
for (src, tgt, num), src_title in sorted(connection_map.items()):
target_title = None
try:
target_issue = client.get_issue(args.org, tgt, num)
if target_issue:
target_title = target_issue.get("title", "")
except Exception as e:
print(f" Could not fetch {tgt}#{num}: {e}", file=sys.stderr)
fact = make_connection_fact(src, tgt, num, src_title, target_title)
# Temporary ID — will be assigned when we know sequence
resolved_facts.append(fact)
# Step 3: Update index.json
index = load_index(index_path)
next_seq = max(
[int(f["id"].split(":")[-1]) for f in index["facts"]
if f["id"].startswith("cross-repo:")]
) + 1 if any(f["id"].startswith("cross-repo:") for f in index["facts"]) else 1
for i, fact in enumerate(resolved_facts):
fact["id"] = f"cross-repo:connection:{next_seq + i:03d}"
index["facts"].append(fact)
save_index(index, index_path)
print(f"\n✓ Updated knowledge/index.json (+{len(resolved_facts)} facts)")
# Step 4: Write to global YAML
append_to_global_yaml(resolved_facts, knowledge_dir)
# Step 5: Generate metrics/report
metrics_dir = Path("metrics")
metrics_dir.mkdir(exist_ok=True)
report_path = metrics_dir / "cross_repo_report.md"
with report_path.open("w") as f:
f.write(f"# Cross-Repo Connection Report\n\n")
f.write(f"Generated: {datetime.now(timezone.utc).isoformat()}\n")
f.write(f"Org: {args.org}\n")
f.write(f"Repos scanned: {len(repos)}\n")
f.write(f"\n## Connections\n\n")
by_source = defaultdict(list)
for fact in resolved_facts:
src = fact["fact"].split(" ")[0]
by_source[src].append(fact)
for src in sorted(by_source.keys()):
f.write(f"### {src}\n\n")
for fact in by_source[src]:
f.write(f"- {fact['fact']}\n")
f.write("\n")
f.write(f"\nTotal connections: {len(resolved_facts)}\n")
print(f"✓ Wrote {report_path}")
print(f"\nDone. Next: run validation:")
print(f" python3 scripts/validate_knowledge.py")
return 0
if __name__ == "__main__":
sys.exit(main())