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Add scripts/graph_visualizer.py — standalone tool that: - Builds knowledge graph from knowledge/index.json - Renders ASCII tree for terminal - Exports DOT for Graphviz - Extracts subgraphs by seed + max_depth - Filters by domain and category Includes test_graph_visualizer.py smoke test (8/8) Addresses #151
207 lines
7.1 KiB
Python
Executable File
207 lines
7.1 KiB
Python
Executable File
#!/usr/bin/env python3
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"""
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graph_visualizer.py — Generate visual graph representations of the knowledge graph.
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Reads knowledge/index.json and renders the fact relationship graph.
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Supports ASCII terminal output and DOT export for Graphviz.
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Usage:
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python3 scripts/graph_visualizer.py # ASCII, all nodes
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python3 scripts/graph_visualizer.py --format dot # DOT output
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python3 scripts/graph_visualizer.py --seed root --max-depth 2
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python3 scripts/graph_visualizer.py --filter-domain hermes-agent
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python3 scripts/graph_visualizer.py --filter-category pitfall
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Acceptance: [x] Subgraph extraction [x] ASCII rendering [x] DOT export [x] Configurable depth/filter
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"""
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import argparse
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import json
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import sys
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from collections import defaultdict, deque
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from pathlib import Path
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from typing import Optional
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def load_index(index_path: Path):
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with open(index_path) as f:
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return json.load(f)
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def build_adjacency(facts):
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adj = defaultdict(list)
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all_ids = {f['id'] for f in facts if 'id' in f}
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for f in facts:
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fid = f.get('id')
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if not fid:
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continue
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for rel in f.get('related', []):
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if rel in all_ids:
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adj[fid].append(rel)
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return dict(adj)
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def build_reverse_adjacency(adj):
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rev = defaultdict(list)
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for src, targets in adj.items():
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for tgt in targets:
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rev[tgt].append(src)
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return dict(rev)
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def extract_subgraph(
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facts,
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adj,
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rev_adj,
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seeds=None,
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max_depth=None,
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filter_domain=None,
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filter_category=None,
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):
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filtered_nodes = set()
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for f in facts:
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fid = f.get('id')
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if not fid:
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continue
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if filter_domain and f.get('domain') != filter_domain:
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continue
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if filter_category and f.get('category') != filter_category:
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continue
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filtered_nodes.add(fid)
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if seeds is None:
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return filtered_nodes if filtered_nodes else {f['id'] for f in facts if 'id' in f}
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valid_seeds = [s for s in seeds if s in filtered_nodes]
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if not valid_seeds:
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return set()
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visited = set()
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queue = deque([(s, 0) for s in valid_seeds])
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while queue:
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node, depth = queue.popleft()
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if node in visited or node not in filtered_nodes:
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continue
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visited.add(node)
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if max_depth is not None and depth >= max_depth:
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continue
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for neighbor in adj.get(node, []):
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if neighbor in filtered_nodes and neighbor not in visited:
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queue.append((neighbor, depth + 1))
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for neighbor in rev_adj.get(node, []):
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if neighbor in filtered_nodes and neighbor not in visited:
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queue.append((neighbor, depth + 1))
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return visited
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def build_fact_map(facts):
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return {f['id']: f for f in facts if 'id' in f and 'fact' in f}
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def render_ascii(subgraph_ids, adj, fact_map):
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lines = []
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visited = set()
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inorder = []
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from collections import deque
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queue = deque()
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inbound = defaultdict(int)
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for src in subgraph_ids:
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for tgt in adj.get(src, []):
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if tgt in subgraph_ids:
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inbound[tgt] += 1
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roots = [n for n in sorted(subgraph_ids) if inbound.get(n, 0) == 0]
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if not roots:
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roots = sorted(subgraph_ids)
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for root in roots:
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queue.append((root, 0, None))
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while queue:
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node, depth, parent_label = queue.popleft()
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if node in visited:
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continue
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visited.add(node)
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fact = fact_map.get(node, {})
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label = fact.get('fact', str(node))[:80]
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category = fact.get('category', 'fact')
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domain = fact.get('domain', 'global')
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node_label = domain + '/' + category + ': ' + label
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if parent_label is None:
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lines.append(f"{' ' * depth}┌─ {node_label}")
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else:
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lines.append(f"{' ' * depth}├─ {node_label}")
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children = [c for c in adj.get(node, []) if c in subgraph_ids]
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for i, child in enumerate(children):
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queue.append((child, depth + 1, node))
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if len(visited) < len(subgraph_ids):
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lines.append("\n[Disconnected nodes — not in traversal order:]")
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for n in sorted(subgraph_ids - visited):
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fact = fact_map.get(n, {})
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label = fact.get('fact', n)[:60]
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lines.append(f" {n} — {label}")
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return "\n".join(lines)
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def render_dot(subgraph_ids, adj, fact_map):
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lines = ["digraph knowledge_graph {", " rankdir=LR;"]
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cat_colors = {
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'fact': '#3498db',
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'pitfall': '#e74c3c',
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'pattern': '#2ecc71',
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'tool-quirk': '#f39c12',
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'question': '#9b59b6',
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}
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for nid in sorted(subgraph_ids):
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fact = fact_map.get(nid, {})
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category = fact.get('category', 'fact')
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domain = fact.get('domain', 'global')
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label = fact.get('fact', nid).replace('"', '\\"')[:80]
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fillcolor = cat_colors.get(category, '#666666')
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lines.append(f' "{nid}" [label="{domain}\\n{category}\\n{label}", fillcolor="{fillcolor}", style=filled, shape=box];')
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lines.append("")
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for src in sorted(subgraph_ids):
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for tgt in adj.get(src, []):
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if tgt in subgraph_ids:
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lines.append(f' "{src}" -> "{tgt}";')
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lines.append("}")
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return "\n".join(lines)
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def main():
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parser = argparse.ArgumentParser(description="Visualize the knowledge graph (ASCII terminal or DOT for Graphviz).")
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parser.add_argument("--index", type=Path, default=Path(__file__).parent.parent / "knowledge" / "index.json",
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help="Path to knowledge/index.json")
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parser.add_argument("--format", choices=["ascii", "dot"], default="ascii",
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help="Output format (default: ascii)")
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parser.add_argument("--output", "-o", type=Path, help="Write output to file (default: stdout)")
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parser.add_argument("--seed", help="Starting fact ID (comma-sep). Omit to render full graph.")
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parser.add_argument("--max-depth", type=int, help="Max traversal depth from seed nodes (requires --seed).")
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parser.add_argument("--filter-domain", help="Only include facts from this domain.")
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parser.add_argument("--filter-category", help="Only include facts of this category.")
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args = parser.parse_args()
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index = load_index(args.index)
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facts = index.get('facts', [])
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adj = build_adjacency(facts)
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rev_adj = build_reverse_adjacency(adj)
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fact_map = build_fact_map(facts)
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seeds = args.seed.split(',') if args.seed else None
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subgraph_ids = extract_subgraph(facts=facts, adj=adj, rev_adj=rev_adj, seeds=seeds,
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max_depth=args.max_depth,
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filter_domain=args.filter_domain,
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filter_category=args.filter_category)
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if not subgraph_ids:
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print("No nodes match the specified filters.", file=sys.stderr)
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sys.exit(1)
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if args.format == "ascii":
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output = render_ascii(subgraph_ids, adj, fact_map)
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else:
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output = render_dot(subgraph_ids, adj, fact_map)
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if args.output:
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args.output.write_text(output)
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print(f"Written: {args.output}", file=sys.stderr)
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else:
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print(output)
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if __name__ == "__main__":
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main()
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