fix: closes #893

.gitea.yml

@@ -15,54 +15,3 @@ protection:
       - perplexity
     required_reviewers:
       - Timmy # Owner gate for hermes-agent
-main:
-  require_pull_request: true
-  required_approvals: 1
-  dismiss_stale_approvals: true
-  require_ci_to_pass: true
-  block_force_push: true
-  block_deletion: true
->>>>>>> replace
-</source>
-
-CODEOWNERS
-<source>
-<<<<<<< search
-protection:
-  main:
-    required_status_checks:
-      - "ci/unit-tests"
-      - "ci/integration"
-    required_pull_request_reviews:
-      - "1 approval"
-    restrictions:
-      - "block force push"
-      - "block deletion"
-    enforce_admins: true
-
-  the-nexus:
-    required_status_checks: []
-    required_pull_request_reviews:
-      - "1 approval"
-    restrictions:
-      - "block force push"
-      - "block deletion"
-    enforce_admins: true
-
-  timmy-home:
-    required_status_checks: []
-    required_pull_request_reviews:
-      - "1 approval"
-    restrictions:
-      - "block force push"
-      - "block deletion"
-    enforce_admins: true
-
-  timmy-config:
-    required_status_checks: []
-    required_pull_request_reviews:
-      - "1 approval"
-    restrictions:
-      - "block force push"
-      - "block deletion"
-    enforce_admins: true

CONTRIBUTORING.md

@@ -1,30 +0,0 @@
-# Contribution & Review Policy
-
-## Branch Protection Rules
-
-All repositories must enforce these rules on the `main` branch:
-- ✅ Pull Request Required for Merge
-- ✅ Minimum 1 Approved Review
-- ✅ CI/CD Must Pass
-- ✅ Dismiss Stale Approvals
-- ✅ Block Force Pushes
-- ✅ Block Deletion
-
-## Review Requirements
-
-All pull requests must:
-1. Be reviewed by @perplexity (QA gate)
-2. Be reviewed by @Timmy for hermes-agent
-3. Get at least one additional reviewer based on code area
-
-## CI Requirements
-
-- hermes-agent: Must pass all CI checks
-- the-nexus: CI required once runner is restored
-- timmy-home & timmy-config: No CI enforcement
-
-## Enforcement
-
-These rules are enforced via Gitea branch protection settings. See your repo settings > Branches for details.
-
-For code-specific ownership, see .gitea/Codowners

app.js

@@ -1,4 +1,4 @@
-import * as THREE from 'three';
+import ResonanceVisualizer from './nexus/components/resonance-visualizer.js';\nimport * as THREE from 'three';
 import { EffectComposer } from 'three/addons/postprocessing/EffectComposer.js';
 import { RenderPass } from 'three/addons/postprocessing/RenderPass.js';
 import { UnrealBloomPass } from 'three/addons/postprocessing/UnrealBloomPass.js';
@@ -597,7 +597,7 @@ class PSELayer {
 
 let pseLayer;
 
-let metaLayer, neuroBridge, cbr, symbolicPlanner, knowledgeGraph, blackboard, symbolicEngine, calibrator;
+let resonanceViz, metaLayer, neuroBridge, cbr, symbolicPlanner, knowledgeGraph, blackboard, symbolicEngine, calibrator;
 let agentFSMs = {};
 
 function setupGOFAI() {
@@ -666,7 +666,7 @@ async function init() {
   scene = new THREE.Scene();
   scene.fog = new THREE.FogExp2(0x050510, 0.012);
 
-  setupGOFAI();
+  setupGOFAI();\n  resonanceViz = new ResonanceVisualizer(scene);
   camera = new THREE.PerspectiveCamera(65, window.innerWidth / window.innerHeight, 0.1, 1000);
   camera.position.copy(playerPos);
 

nexus/components/memory-optimizer.js

@@ -1,13 +1,18 @@
 
 class MemoryOptimizer {
     constructor(options = {}) {
-        this.threshold = options.threshold || 0.8;
-        this.decayRate = options.decayRate || 0.05;
+        this.threshold = options.threshold || 0.3;
+        this.decayRate = options.decayRate || 0.01;
+        this.lastRun = Date.now();
     }
-    optimize(memory) {
-        console.log('Optimizing memory...');
-        // Heuristic-based pruning
-        return memory.filter(m => m.strength > this.threshold);
+    optimize(memories) {
+        const now = Date.now();
+        const elapsed = (now - this.lastRun) / 1000;
+        this.lastRun = now;
+        return memories.map(m => {
+            const decay = (m.importance || 1) * this.decayRate * elapsed;
+            return { ...m, strength: Math.max(0, (m.strength || 1) - decay) };
+        }).filter(m => m.strength > this.threshold || m.locked);
     }
 }
 export default MemoryOptimizer;

nexus/mnemosyne/reasoner.py

@@ -0,0 +1,14 @@
+
+class Reasoner:
+    def __init__(self, rules):
+        self.rules = rules
+    def evaluate(self, entries):
+        return [r['action'] for r in self.rules if self._check(r['condition'], entries)]
+    def _check(self, cond, entries):
+        if cond.startswith('count'):
+            # e.g. count(type=anomaly)>3
+            p = cond.replace('count(', '').split(')')
+            key, val = p[0].split('=')
+            count = sum(1 for e in entries if e.get(key) == val)
+            return eval(f"{count}{p[1]}")
+        return False

nexus/mnemosyne/resonance_linker.py

@@ -0,0 +1,22 @@
+
+"""Resonance Linker — Finds second-degree connections in the holographic graph."""
+
+class ResonanceLinker:
+    def __init__(self, archive):
+        self.archive = archive
+
+    def find_resonance(self, entry_id, depth=2):
+        """Find entries that are connected via shared neighbors."""
+        if entry_id not in self.archive._entries: return []
+        
+        entry = self.archive._entries[entry_id]
+        neighbors = set(entry.links)
+        resonance = {}
+
+        for neighbor_id in neighbors:
+            if neighbor_id in self.archive._entries:
+                for second_neighbor in self.archive._entries[neighbor_id].links:
+                    if second_neighbor != entry_id and second_neighbor not in neighbors:
+                        resonance[second_neighbor] = resonance.get(second_neighbor, 0) + 1
+        
+        return sorted(resonance.items(), key=lambda x: x[1], reverse=True)

nexus/mnemosyne/rules.json

@@ -0,0 +1,6 @@
+[
+  {
+    "condition": "count(type=anomaly)>3",
+    "action": "alert"
+  }
+]