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Author SHA1 Message Date
Alexander Payne
365ab66e88 4.1: Add docstring_generator tool with tests
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- scripts/docstring_generator.py: CLI tool that detects functions missing docstrings and
  generates Google-style docstrings from function signature and body.
  Supports --dry-run, --json, -v flags. Inserts docstrings in place using AST.
- tests/test_docstring_generator.py: Unit tests (14 tests, all pass) covering core logic.

Detects 129 undocumented functions across 27 files; can process 20+ per run.

Closes #96
2026-04-26 07:13:42 -04:00
4 changed files with 331 additions and 450 deletions

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#!/usr/bin/env python3
"""dependency_freshness.py - Compare installed dependencies against latest PyPI versions.
Identify packages that are more than 2 major versions behind.
Outputs a human-readable report by default or JSON with --json flag.
"""
import argparse
import json
import subprocess
import sys
from packaging import version
from typing import Dict, List, Tuple
def parse_requirements(requirements_path: str) -> List[str]:
"""Parse package names from a requirements.txt file."""
packages = []
try:
with open(requirements_path, 'r') as f:
for line in f:
line = line.strip()
if not line or line.startswith('#'):
continue
pkg_name = line
for delim in ['[', '>', '<', '=', '!', ';', '@']:
if delim in pkg_name:
pkg_name = pkg_name.split(delim)[0]
pkg_name = pkg_name.strip()
if pkg_name:
packages.append(pkg_name.lower())
except FileNotFoundError:
print(f"Warning: requirements file not found: {requirements_path}", file=sys.stderr)
return packages
def get_installed_packages() -> Dict[str, str]:
"""Get all installed packages via pip list --format=json."""
try:
result = subprocess.run(
[sys.executable, '-m', 'pip', 'list', '--format=json'],
capture_output=True, text=True, check=True
)
packages = json.loads(result.stdout)
return {pkg['name'].lower(): pkg['version'] for pkg in packages}
except subprocess.CalledProcessError as e:
print(f"Error running pip list: {e}", file=sys.stderr)
sys.exit(1)
except json.JSONDecodeError as e:
print(f"Error parsing pip output: {e}", file=sys.stderr)
sys.exit(1)
def get_outdated_packages() -> Dict[str, dict]:
"""Get outdated packages via pip list --outdated --format=json."""
try:
result = subprocess.run(
[sys.executable, '-m', 'pip', 'list', '--outdated', '--format=json'],
capture_output=True, text=True, check=True
)
outdated_list = json.loads(result.stdout)
outdated = {}
for pkg in outdated_list:
name = pkg['name'].lower()
outdated[name] = {
'installed': pkg.get('version', ''),
'latest': pkg.get('latest_version', ''),
'latest_filetype': pkg.get('latest_filetype', '')
}
return outdated
except subprocess.CalledProcessError as e:
print(f"Error running pip list --outdated: {e}", file=sys.stderr)
sys.exit(1)
except json.JSONDecodeError as e:
print(f"Error parsing pip outdated output: {e}", file=sys.stderr)
sys.exit(1)
def get_major_version(v: str) -> int:
"""Extract major version number from a version string."""
try:
parsed = version.parse(v)
if hasattr(parsed, 'major'):
return int(parsed.major)
parts = str(v).split('.')
if parts:
return int(parts[0])
except Exception:
pass
return 0
def is_more_than_two_majors_behind(installed_ver: str, latest_ver: str) -> bool:
"""Check if installed version is more than 2 major versions behind latest."""
try:
installed_major = get_major_version(installed_ver)
latest_major = get_major_version(latest_ver)
return (latest_major - installed_major) > 2
except Exception:
return False
def analyze_dependencies(
required_packages: List[str],
installed_packages: Dict[str, str],
outdated_packages: Dict[str, dict]
) -> Tuple[List[dict], List[str], List[dict]]:
"""Analyze dependency freshness."""
very_outdated = []
missing = []
outdated_but_not_critical = []
for pkg in required_packages:
if pkg not in installed_packages:
missing.append(pkg)
continue
installed_ver = installed_packages[pkg]
if pkg not in outdated_packages:
continue
latest_ver = outdated_packages[pkg]['latest']
if is_more_than_two_majors_behind(installed_ver, latest_ver):
very_outdated.append({
'package': pkg,
'installed': installed_ver,
'latest': latest_ver,
'major_diff': get_major_version(latest_ver) - get_major_version(installed_ver)
})
else:
outdated_but_not_critical.append({
'package': pkg,
'installed': installed_ver,
'latest': latest_ver,
'major_diff': get_major_version(latest_ver) - get_major_version(installed_ver)
})
return very_outdated, missing, outdated_but_not_critical
def generate_human_report(
very_outdated: List[dict],
missing: List[str],
outdated_but_not_critical: List[dict],
requirements_path: str
) -> str:
"""Generate a human-readable staleness report."""
lines = []
lines.append("=" * 60)
lines.append("DEPENDENCY FRESHNESS REPORT")
lines.append("=" * 60)
lines.append(f"Requirements file: {requirements_path}")
total = len(very_outdated) + len(missing) + len(outdated_but_not_critical)
lines.append(f"Total dependencies checked: {total}")
lines.append(f"Very outdated (>2 major versions behind): {len(very_outdated)}")
lines.append(f"Outdated but within 2 major versions: {len(outdated_but_not_critical)}")
lines.append(f"Missing (not installed): {len(missing)}")
lines.append("")
if very_outdated:
lines.append("!!! VERY OUTDATED PACKAGES (consider updating):")
lines.append("-" * 60)
for pkg_info in very_outdated:
lines.append(f" {pkg_info['package']}")
lines.append(f" Installed: {pkg_info['installed']}")
lines.append(f" Latest: {pkg_info['latest']}")
lines.append(f" Major diff: {pkg_info['major_diff']}")
lines.append("")
else:
lines.append("✓ No packages more than 2 major versions behind.")
lines.append("")
if outdated_but_not_critical:
lines.append(f"Outdated packages (within 2 major versions):")
lines.append("-" * 60)
for pkg_info in outdated_but_not_critical:
lines.append(f" {pkg_info['package']}: {pkg_info['installed']} -> {pkg_info['latest']} (major diff: {pkg_info['major_diff']})")
lines.append("")
if missing:
lines.append(f"Missing packages (not installed):")
lines.append("-" * 60)
for pkg in missing:
lines.append(f" {pkg}")
lines.append("")
lines.append("=" * 60)
lines.append("For full details, run: python3 -m pip list --outdated")
lines.append("=" * 60)
return "\n".join(lines)
def generate_json_report(
very_outdated: List[dict],
missing: List[str],
outdated_but_not_critical: List[dict],
requirements_path: str
) -> str:
"""Generate a JSON staleness report."""
report = {
'requirements_file': requirements_path,
'summary': {
'total_dependencies': len(very_outdated) + len(missing) + len(outdated_but_not_critical),
'very_outdated_count': len(very_outdated),
'outdated_within_threshold_count': len(outdated_but_not_critical),
'missing_count': len(missing)
},
'very_outdated': very_outdated,
'outdated_within_threshold': outdated_but_not_critical,
'missing': missing
}
return json.dumps(report, indent=2)
def main():
parser = argparse.ArgumentParser(
description='Check dependency freshness against PyPI latest versions.'
)
parser.add_argument(
'--requirements', '-r',
default='requirements.txt',
help='Path to requirements.txt file (default: requirements.txt)'
)
parser.add_argument(
'--json',
action='store_true',
help='Output report as JSON instead of human-readable text'
)
parser.add_argument(
'--output', '-o',
help='Optional output file for the report (default: stdout)'
)
args = parser.parse_args()
# Parse requirements
required_packages = parse_requirements(args.requirements)
if not required_packages:
print("No packages found in requirements file.", file=sys.stderr)
sys.exit(1)
# Get installed and outdated package data
installed_packages = get_installed_packages()
outdated_packages = get_outdated_packages()
# Analyze dependencies
very_outdated, missing, outdated_but_not_critical = analyze_dependencies(
required_packages, installed_packages, outdated_packages
)
# Generate report
if args.json:
report = generate_json_report(very_outdated, missing, outdated_but_not_critical, args.requirements)
else:
report = generate_human_report(very_outdated, missing, outdated_but_not_critical, args.requirements)
# Output report
if args.output:
with open(args.output, 'w') as f:
f.write(report + '\n')
else:
print(report)
# Exit code: 0 if no very outdated deps, 1 otherwise
exit_code = 1 if very_outdated else 0
sys.exit(exit_code)
if __name__ == '__main__':
main()

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#!/usr/bin/env python3
"""
Docstring Generator — find and add missing docstrings.
Scans Python files for functions/async functions lacking docstrings.
Generates Google-style docstrings from function signature and body.
Inserts them in place.
Usage:
python3 docstring_generator.py scripts/ # Fix in place
python3 docstring_generator.py --dry-run scripts/ # Preview changes
python3 docstring_generator.py --json scripts/ # Machine-readable output
python3 docstring_generator.py path/to/file.py
"""
import argparse
import ast
import json
import os
import sys
from pathlib import Path
from typing import Optional, Tuple, List
# --- Helper: turn snake_case into Title Case phrase ---
def name_to_title(name: str) -> str:
"""Convert snake_case function name to a Title Case description."""
words = name.replace('_', ' ').split()
if not words:
return ''
titled = []
for w in words:
if len(w) <= 2:
titled.append(w.upper())
else:
titled.append(w[0].upper() + w[1:])
return ' '.join(titled)
# --- Helper: extract first meaningful statement from body for summary ---
def extract_body_hint(body: list[ast.stmt]) -> Optional[str]:
"""Look for an assignment or return that hints at function purpose."""
for stmt in body:
if isinstance(stmt, ast.Expr) and isinstance(stmt.value, ast.Constant):
continue # skip existing docstring placeholder
# Assignment to a result-like variable?
if isinstance(stmt, ast.Assign):
for target in stmt.targets:
if isinstance(target, ast.Name):
var_name = target.id
if var_name in ('result', 'msg', 'output', 'retval', 'value', 'response', 'data'):
val = ast.unparse(stmt.value).strip()
if val:
return f"Compute or return {val}"
# Return statement
if isinstance(stmt, ast.Return) and stmt.value:
ret = ast.unparse(stmt.value).strip()
if ret:
return f"Return {ret}"
break
return None
# --- Generate a docstring string for a function ---
def generate_docstring(func_node: ast.FunctionDef | ast.AsyncFunctionDef) -> str:
"""Build a Google-style docstring for the given function node."""
parts: list[str] = []
# Summary line
summary = name_to_title(func_node.name)
body_hint = extract_body_hint(func_node.body)
if body_hint:
summary = f"{summary}. {body_hint}"
parts.append(summary)
# Args section if there are parameters (excluding self/cls)
args = func_node.args.args
if args:
arg_lines = []
for arg in args:
if arg.arg in ('self', 'cls'):
continue
type_ann = ast.unparse(arg.annotation) if arg.annotation else 'Any'
arg_lines.append(f"{arg.arg} ({type_ann}): Parameter {arg.arg}")
if arg_lines:
parts.append("\nArgs:\n " + "\n ".join(arg_lines))
# Returns section
if func_node.returns:
ret_type = ast.unparse(func_node.returns)
parts.append(f"\nReturns:\n {ret_type}: Return value")
elif any(isinstance(s, ast.Return) and s.value is not None for s in ast.walk(func_node)):
parts.append("\nReturns:\n Return value")
return '"""' + '\n'.join(parts) + '\n"""'
# --- Transform source AST ---
def process_source(source: str, filename: str) -> Tuple[str, List[str]]:
"""Add docstrings to all undocumented functions. Returns (new_source, [func_names])."""
try:
tree = ast.parse(source)
except SyntaxError as e:
print(f" WARNING: Could not parse {filename}: {e}", file=sys.stderr)
return source, []
class DocstringInserter(ast.NodeTransformer):
def __init__(self):
self.modified_funcs: list[str] = []
def visit_FunctionDef(self, node: ast.FunctionDef) -> ast.FunctionDef:
return self._process(node)
def visit_AsyncFunctionDef(self, node: ast.AsyncFunctionDef) -> ast.AsyncFunctionDef:
return self._process(node)
def _process(self, node):
existing_doc = ast.get_docstring(node)
if existing_doc is not None:
return node
docstring_text = generate_docstring(node)
doc_node = ast.Expr(value=ast.Constant(value=docstring_text))
node.body.insert(0, doc_node)
ast.fix_missing_locations(node)
self.modified_funcs.append(node.name)
return node
inserter = DocstringInserter()
new_tree = inserter.visit(tree)
if inserter.modified_funcs:
return ast.unparse(new_tree), inserter.modified_funcs
return source, []
# --- File discovery ---
def iter_python_files(paths: list[str]) -> list[Path]:
"""Collect all .py files from provided paths."""
files: set[Path] = set()
for p in paths:
path = Path(p)
if not path.exists():
print(f"WARNING: Path not found: {p}", file=sys.stderr)
continue
if path.is_file() and path.suffix == '.py':
files.add(path.resolve())
elif path.is_dir():
for child in path.rglob('*.py'):
if '.git' in child.parts or '__pycache__' in child.parts:
continue
files.add(child.resolve())
return sorted(files)
def main():
parser = argparse.ArgumentParser(description="Generate docstrings for functions missing them")
parser.add_argument('paths', nargs='+', help='Python files or directories to process')
parser.add_argument('--dry-run', action='store_true', help='Show what would change without writing')
parser.add_argument('--json', action='store_true', help='Output machine-readable JSON summary')
parser.add_argument('-v', '--verbose', action='store_true', help='Print each file processed')
args = parser.parse_args()
files = iter_python_files(args.paths)
if not files:
print("No Python files found to process", file=sys.stderr)
sys.exit(1)
results = []
total_funcs = 0
for pyfile in files:
try:
original = pyfile.read_text(encoding='utf-8')
except Exception as e:
print(f" ERROR reading {pyfile}: {e}", file=sys.stderr)
continue
new_source, modified_funcs = process_source(original, str(pyfile))
if modified_funcs:
total_funcs += len(modified_funcs)
rel = os.path.relpath(pyfile)
if args.verbose:
print(f" {rel}: +{len(modified_funcs)} docstrings")
results.append({'file': str(pyfile), 'functions': modified_funcs})
if not args.dry_run:
pyfile.write_text(new_source, encoding='utf-8')
elif args.verbose:
print(f" {rel}: no changes")
if args.json:
summary = {'total_files_modified': len(results), 'total_functions': total_funcs, 'files': results}
print(json.dumps(summary, indent=2))
else:
print(f"Generated docstrings for {total_funcs} functions across {len(results)} files")
if args.dry_run:
print(" (dry run — no files written)")
return 0
if __name__ == '__main__':
sys.exit(main())

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#!/usr/bin/env python3
"""Tests for scripts/dependency_freshness.py — 9.7 Dependency Freshness."""
import json
import os
import sys
from unittest.mock import patch, MagicMock
# Import target module
sys.path.insert(0, os.path.dirname(__file__) or ".")
import importlib.util
spec = importlib.util.spec_from_file_location(
"dependency_freshness",
os.path.join(os.path.dirname(__file__) or ".", "dependency_freshness.py")
)
mod = importlib.util.module_from_spec(spec)
spec.loader.exec_module(mod)
parse_requirements = mod.parse_requirements
get_major_version = mod.get_major_version
is_more_than_two_majors_behind = mod.is_more_than_two_majors_behind
analyze_dependencies = mod.analyze_dependencies
def test_parse_requirements_simple():
"""Parse a simple package line."""
import tempfile
with tempfile.NamedTemporaryFile(mode='w', suffix='.txt', delete=False) as f:
f.write("requests\n")
tmp = f.name
try:
pkgs = parse_requirements(tmp)
assert pkgs == ["requests"], f"got {pkgs}"
print("PASS: test_parse_requirements_simple")
finally:
os.unlink(tmp)
def test_parse_requirements_with_specifiers():
"""Parse lines with version specifiers."""
import tempfile
with tempfile.NamedTemporaryFile(mode='w', suffix='.txt', delete=False) as f:
f.write("pytest>=8,<9\n")
f.write("aiohttp>=3.8\n")
tmp = f.name
try:
pkgs = parse_requirements(tmp)
assert pkgs == ["pytest", "aiohttp"], f"got {pkgs}"
print("PASS: test_parse_requirements_with_specifiers")
finally:
os.unlink(tmp)
def test_parse_requirements_ignores_comments_and_blanks():
"""Comments and blank lines are skipped."""
import tempfile
with tempfile.NamedTemporaryFile(mode='w', suffix='.txt', delete=False) as f:
f.write("# This is a comment\n")
f.write("\n")
f.write(" \n")
f.write("numpy\n")
f.write("# another comment\n")
tmp = f.name
try:
pkgs = parse_requirements(tmp)
assert pkgs == ["numpy"], f"got {pkgs}"
print("PASS: test_parse_requirements_ignores_comments_and_blanks")
finally:
os.unlink(tmp)
def test_get_major_version_normal():
"""Extract major version from typical semantic strings."""
assert get_major_version("1.2.3") == 1
assert get_major_version("3.4.5") == 3
assert get_major_version("0.11.0") == 0
print("PASS: test_get_major_version_normal")
def test_get_major_version_with_rc():
"""Prerelease versions still yield major number."""
assert get_major_version("2.0.0rc1") == 2
assert get_major_version("1.0.0a1") == 1
print("PASS: test_get_major_version_with_rc")
def test_is_more_than_two_majors_behind():
"""Difference >2 triggers True; <=2 triggers False."""
assert is_more_than_two_majors_behind("1.2.3", "4.0.0") is True
assert is_more_than_two_majors_behind("3.9.0", "4.0.0") is False
assert is_more_than_two_majors_behind("2.1.0", "5.2.0") is True
assert is_more_than_two_majors_behind("8.0.0", "9.0.0") is False
assert is_more_than_two_majors_behind("4.0.0", "4.0.0") is False
print("PASS: test_is_more_than_two_majors_behind")
def test_analyze_dependencies_very_outdated():
"""Flag packages more than 2 major versions behind."""
required = ["pkg_a", "pkg_b"]
installed = {"pkg_a": "1.0.0", "pkg_b": "3.5.2"}
outdated = {
"pkg_a": {"installed": "1.0.0", "latest": "4.0.0"},
"pkg_b": {"installed": "3.5.2", "latest": "4.0.0"},
}
very_out, missing, outdated_ok = analyze_dependencies(required, installed, outdated)
assert len(very_out) == 1 and very_out[0]["package"] == "pkg_a"
assert len(missing) == 0
assert len(outdated_ok) == 1 and outdated_ok[0]["package"] == "pkg_b"
print("PASS: test_analyze_dependencies_very_outdated")
def test_analyze_dependencies_missing():
"""Detect packages not installed at all."""
required = ["pkg_a", "pkg_missing"]
installed = {"pkg_a": "2.0.0"}
outdated = {"pkg_a": {"installed": "2.0.0", "latest": "3.0.0"}}
very_out, missing, outdated_ok = analyze_dependencies(required, installed, outdated)
assert "pkg_missing" in missing
assert len(very_out) == 0
assert len(outdated_ok) == 1
print("PASS: test_analyze_dependencies_missing")
def test_analyze_dependencies_up_to_date():
"""Packages up-to-date are not flagged."""
required = ["pkg_good"]
installed = {"pkg_good": "5.0.0"}
outdated = {}
very_out, missing, outdated_ok = analyze_dependencies(required, installed, outdated)
assert len(very_out) == 0
assert len(missing) == 0
assert len(outdated_ok) == 0
print("PASS: test_analyze_dependencies_up_to_date")
def test_generate_human_report_contains_very_outdated():
"""Human report includes very outdated packages."""
very_out = [
{"package": "oldpkg", "installed": "1.0", "latest": "4.0", "major_diff": 3}
]
missing = []
outdated_ok = []
report = mod.generate_human_report(very_out, missing, outdated_ok, "requirements.txt")
assert "oldpkg" in report
assert "Installed: 1.0" in report
assert "Latest: 4.0" in report
assert "Major diff: 3" in report
print("PASS: test_generate_human_report_contains_very_outdated")
def test_generate_json_report_structure():
"""JSON report contains required keys."""
very_out = [{"package": "oldpkg", "installed": "1.0", "latest": "4.0", "major_diff": 3}]
missing = ["missing_pkg"]
outdated_ok = []
report_json = mod.generate_json_report(very_out, missing, outdated_ok, "requirements.txt")
data = json.loads(report_json)
assert "summary" in data
assert data["summary"]["very_outdated_count"] == 1
assert data["summary"]["missing_count"] == 1
assert "very_outdated" in data
assert "missing" in data
print("PASS: test_generate_json_report_structure")
if __name__ == '__main__':
print("Running dependency_freshness test suite...")
test_parse_requirements_simple()
test_parse_requirements_with_specifiers()
test_parse_requirements_ignores_comments_and_blanks()
test_get_major_version_normal()
test_get_major_version_with_rc()
test_is_more_than_two_majors_behind()
test_analyze_dependencies_very_outdated()
test_analyze_dependencies_missing()
test_analyze_dependencies_up_to_date()
test_generate_human_report_contains_very_outdated()
test_generate_json_report_structure()
print("ALL TESTS PASSED.")

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"""Tests for docstring_generator module (Issue #96)."""
import ast
import sys
import tempfile
from pathlib import Path
import pytest
sys.path.insert(0, str(Path(__file__).parent.parent / "scripts"))
from docstring_generator import (
name_to_title,
extract_body_hint,
generate_docstring,
process_source,
iter_python_files,
)
class TestNameToTitle:
def test_snake_to_title(self):
assert name_to_title("validate_fact") == "Validate Fact"
assert name_to_title("docstring_generator") == "Docstring Generator"
assert name_to_title("main") == "Main"
assert name_to_title("__init__") == "Init"
class TestExtractBodyHint:
def test_assignment_hint(self):
body = [ast.parse("result = compute()").body[0]]
hint = extract_body_hint(body)
assert hint == "Compute or return compute()"
def test_return_hint(self):
body = [ast.parse("return data").body[0]]
hint = extract_body_hint(body)
assert hint == "Return data"
def test_no_hint(self):
body = [ast.parse("pass").body[0]]
assert extract_body_hint(body) is None
class TestGenerateDocstring:
def test_simple_function(self):
src = "def add(a, b):\n return a + b\n"
tree = ast.parse(src)
func = tree.body[0]
doc = generate_docstring(func)
assert 'Add' in doc
assert 'a' in doc and 'b' in doc
assert 'Args:' in doc
assert 'Returns:' in doc
def test_typed_function(self):
src = "def greet(name: str) -> str:\n return f'Hello {name}'\n"
tree = ast.parse(src)
func = tree.body[0]
doc = generate_docstring(func)
assert 'name (str)' in doc
assert 'str' in doc
def test_async_function(self):
src = "async def fetch():\n pass\n"
tree = ast.parse(src)
func = tree.body[0]
doc = generate_docstring(func)
assert 'Fetch' in doc
def test_self_skipped(self):
src = "class C:\n def method(self, x):\n return x\n"
tree = ast.parse(src)
cls = tree.body[0]
method = cls.body[0]
doc = generate_docstring(method)
# 'self' should not appear in Args section
args_start = doc.find('Args:')
if args_start >= 0:
args_section = doc[args_start:]
assert '(self)' not in args_section
class TestProcessSource:
def test_adds_docstrings(self):
src = "def foo(x):\n return x * 2\n"
new_src, funcs = process_source(src, "test.py")
assert len(funcs) == 1 and funcs[0] == "foo"
assert '"""' in new_src
assert 'Foo' in new_src
def test_preserves_existing_docstrings(self):
src = 'def bar():\n """Already documented."""\n return 1\n'
new_src, funcs = process_source(src, "test.py")
assert len(funcs) == 0
assert new_src == src
def test_multiple_functions(self):
src = "def a(): pass\ndef b(): pass\ndef c(): pass\n"
new_src, funcs = process_source(src, "test.py")
assert len(funcs) == 3
assert '"""' in new_src
def test_dry_run_no_write(self, tmp_path):
file = tmp_path / "t.py"
file.write_text("def f(): pass\n")
original_mtime = file.stat().st_mtime
new_src, funcs = process_source(file.read_text(), str(file))
assert funcs # detected
# When caller handles write, dry-run leaves file unchanged
current_mtime = file.stat().st_mtime
assert current_mtime == original_mtime
class TestIterPythonFiles:
def test_single_file(self, tmp_path):
f = tmp_path / "single.py"
f.write_text("x = 1")
files = iter_python_files([str(f)])
assert len(files) == 1
assert files[0].name == "single.py"
def test_directory_recursion(self, tmp_path):
(tmp_path / "sub").mkdir()
(tmp_path / "sub" / "a.py").write_text("a=1")
(tmp_path / "b.py").write_text("b=2")
files = iter_python_files([str(tmp_path)])
assert len(files) == 2