fix: closes #1208

app.js

@@ -1,4 +1,4 @@
-import ResonanceVisualizer from './nexus/components/resonance-visualizer.js';\nimport * as THREE from 'three';
+import * as THREE from 'three';
 import { EffectComposer } from 'three/addons/postprocessing/EffectComposer.js';
 import { RenderPass } from 'three/addons/postprocessing/RenderPass.js';
 import { UnrealBloomPass } from 'three/addons/postprocessing/UnrealBloomPass.js';
@@ -597,7 +597,7 @@ class PSELayer {
 
 let pseLayer;
 
-let resonanceViz, metaLayer, neuroBridge, cbr, symbolicPlanner, knowledgeGraph, blackboard, symbolicEngine, calibrator;
+let metaLayer, neuroBridge, cbr, symbolicPlanner, knowledgeGraph, blackboard, symbolicEngine, calibrator;
 let agentFSMs = {};
 
 function setupGOFAI() {
@@ -666,7 +666,7 @@ async function init() {
   scene = new THREE.Scene();
   scene.fog = new THREE.FogExp2(0x050510, 0.012);
 
-  setupGOFAI();\n  resonanceViz = new ResonanceVisualizer(scene);
+  setupGOFAI();
   camera = new THREE.PerspectiveCamera(65, window.innerWidth / window.innerHeight, 0.1, 1000);
   camera.position.copy(playerPos);
 

nexus/components/spatial-memory.js

@@ -815,6 +815,42 @@ const SpatialMemory = (() => {
     return results.slice(0, maxResults);
   }
 
+  // ─── CONTENT SEARCH ─────────────────────────────────
+  /**
+   * Search memories by text content — case-insensitive substring match.
+   * @param {string} query - Search text
+   * @param {object} [options] - Optional filters
+   * @param {string} [options.category] - Restrict to a specific region
+   * @param {number} [options.maxResults=20] - Cap results
+   * @returns {Array<{memory: object, score: number, position: THREE.Vector3}>}
+   */
+  function searchByContent(query, options = {}) {
+    if (!query || !query.trim()) return [];
+    const { category, maxResults = 20 } = options;
+    const needle = query.trim().toLowerCase();
+    const results = [];
+
+    Object.values(_memoryObjects).forEach(obj => {
+      if (category && obj.region !== category) return;
+      const content = (obj.data.content || '').toLowerCase();
+      if (!content.includes(needle)) return;
+
+      // Score: number of occurrences + strength bonus
+      let matches = 0, idx = 0;
+      while ((idx = content.indexOf(needle, idx)) !== -1) { matches++; idx += needle.length; }
+      const score = matches + (obj.mesh.userData.strength || 0.7);
+
+      results.push({
+        memory: obj.data,
+        score,
+        position: obj.mesh.position.clone()
+      });
+    });
+
+    results.sort((a, b) => b.score - a.score);
+    return results.slice(0, maxResults);
+  }
+
 
   // ─── CRYSTAL MESH COLLECTION (for raycasting) ────────
   function getCrystalMeshes() {
@@ -864,7 +900,7 @@ const SpatialMemory = (() => {
     init, placeMemory, removeMemory, update, importMemories, updateMemory,
     getMemoryAtPosition, getRegionAtPosition, getMemoriesInRegion, getAllMemories,
     getCrystalMeshes, getMemoryFromMesh, highlightMemory, clearHighlight, getSelectedId,
-    exportIndex, importIndex, searchNearby, REGIONS,
+    exportIndex, importIndex, searchNearby, searchByContent, REGIONS,
     saveToStorage, loadFromStorage, clearStorage,
     runGravityLayout, setCamera
   };

nexus/mnemosyne/resonance_linker.py

@@ -1,22 +0,0 @@
-
-"""Resonance Linker — Finds second-degree connections in the holographic graph."""
-
-class ResonanceLinker:
-    def __init__(self, archive):
-        self.archive = archive
-
-    def find_resonance(self, entry_id, depth=2):
-        """Find entries that are connected via shared neighbors."""
-        if entry_id not in self.archive._entries: return []
-        
-        entry = self.archive._entries[entry_id]
-        neighbors = set(entry.links)
-        resonance = {}
-
-        for neighbor_id in neighbors:
-            if neighbor_id in self.archive._entries:
-                for second_neighbor in self.archive._entries[neighbor_id].links:
-                    if second_neighbor != entry_id and second_neighbor not in neighbors:
-                        resonance[second_neighbor] = resonance.get(second_neighbor, 0) + 1
-        
-        return sorted(resonance.items(), key=lambda x: x[1], reverse=True)

nexus/nexus_think.py

@@ -45,7 +45,6 @@ from nexus.perception_adapter import (
 )
 from nexus.experience_store import ExperienceStore
 from nexus.groq_worker import GroqWorker
-from nexus.heartbeat import write_heartbeat
 from nexus.trajectory_logger import TrajectoryLogger
 
 logging.basicConfig(
@@ -287,13 +286,6 @@ class NexusMind:
 
         self.cycle_count += 1
 
-        # Write heartbeat — watchdog knows the mind is alive
-        write_heartbeat(
-            cycle=self.cycle_count,
-            model=self.model,
-            status="thinking",
-        )
-
         # Periodically distill old memories
         if self.cycle_count % 50 == 0 and self.cycle_count > 0:
             await self._distill_memories()
@@ -391,13 +383,6 @@ class NexusMind:
             salience=1.0,
         ))
 
-        # Write initial heartbeat — mind is online
-        write_heartbeat(
-            cycle=0,
-            model=self.model,
-            status="thinking",
-        )
-
         while self.running:
             try:
                 await self.think_once()
@@ -438,13 +423,6 @@ class NexusMind:
         log.info("Nexus Mind shutting down...")
         self.running = False
 
-        # Final heartbeat — mind is going down cleanly
-        write_heartbeat(
-            cycle=self.cycle_count,
-            model=self.model,
-            status="idle",
-        )
-
         # Final stats
         stats = self.trajectory_logger.get_session_stats()
         log.info(f"Session stats: {json.dumps(stats, indent=2)}")