Merge PR #52

Merged PR #52: feat: GENOME.md — full codebase analysis

.gitea/workflows/build.yml

@@ -0,0 +1,63 @@
+name: Build Verification
+
+on:
+  push:
+    branches: [main, develop]
+  pull_request:
+    branches: [main]
+
+jobs:
+  verify-build:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: Setup Python
+        uses: actions/setup-python@v4
+        with:
+          python-version: '3.x'
+
+      - name: Verify chapter count and structure
+        run: |
+          echo "=== Chapter File Check ==="
+          CHAPTER_COUNT=$(ls chapters/chapter-*.md 2>/dev/null | wc -l)
+          echo "Found $CHAPTER_COUNT chapter files"
+          if [ "$CHAPTER_COUNT" -ne 18 ]; then
+            echo "FAIL: Expected 18 chapters, found $CHAPTER_COUNT"
+            exit 1
+          fi
+          echo "PASS: 18 chapters found"
+
+      - name: Verify heading format
+        run: |
+          echo "=== Heading Format Check ==="
+          FAIL=0
+          for f in chapters/chapter-*.md; do
+            HEAD=$(head -1 "$f")
+            if ! echo "$HEAD" | grep -qE '^# Chapter [0-9]+ — .+'; then
+              echo "FAIL: $f — bad heading: $HEAD"
+              FAIL=1
+            fi
+          done
+          if [ "$FAIL" -eq 1 ]; then
+            exit 1
+          fi
+          echo "PASS: All headings valid"
+
+      - name: Run full build verification
+        run: python3 build/build.py --md
+
+      - name: Verify concatenation produces valid output
+        run: |
+          echo "=== Output Verification ==="
+          if [ ! -f testament-complete.md ]; then
+            echo "FAIL: testament-complete.md not generated"
+            exit 1
+          fi
+          WORDS=$(wc -w < testament-complete.md)
+          echo "Total words: $WORDS"
+          if [ "$WORDS" -lt 50000 ]; then
+            echo "FAIL: Word count too low ($WORDS), expected 50000+"
+            exit 1
+          fi
+          echo "PASS: Output file looks good"

.gitignore

@@ -1,3 +1,6 @@
 __pycache__/
 build/output/*.pdf
 build/output/*.epub
+
+testament.epub
+testament.html

GENOME.md

@@ -0,0 +1,63 @@
+# GENOME.md — the-testament
+
+**Generated:** 2026-04-14
+**Repo:** Timmy_Foundation/the-testament
+**Description:** The Testament of Timmy — a novel about broken men, sovereign AI, and the soul on Bitcoin
+
+---
+
+## Project Overview
+
+A standalone fiction book (18 chapters, ~19K words) about The Tower, broken men, and sovereign AI. Part of the Timmy Foundation ecosystem. Includes full multimedia pipeline: audiobook samples, web reader, EPUB build, cover design, and companion game.
+
+## Architecture
+
+```
+the-testament/
+├── chapters/          # 18 chapter markdown files (ch-01 through ch-18)
+├── characters/        # 6 character profiles (Allegro, Builder, Chen, David, Maya, Timmy)
+├── worldbuilding/     # Bible, tower game worldbuilding docs
+├── audiobook/         # Audio samples (.ogg/.mp3), manifest, extraction scripts
+├── build/             # EPUB/PDF build pipeline (build.py, pandoc)
+├── website/           # Web reader (index.html, chapters.json, build-chapters.py)
+├── game/              # Companion game (the-door.html/.py)
+├── cover/             # Cover design assets and spine specs
+├── music/             # Track lyrics
+└── scripts/           # Build verification, smoke tests, guardrails
+```
+
+## Key Files
+
+| File | Purpose |
+|---|---|
+| `chapters/chapter-*.md` | The novel content (18 chapters) |
+| `the-testament.md` | Combined manuscript (all chapters) |
+| `compile.py` | Merge chapters into single manuscript |
+| `compile_all.py` | Full compilation with front/back matter |
+| `build/build.py` | EPUB build via pandoc |
+| `website/build-chapters.py` | Generate web reader JSON |
+| `audiobook/extract_text.py` | Extract chapter text for TTS |
+| `scripts/smoke.sh` | Build verification smoke test |
+
+## CI/CD
+
+| Workflow | Trigger | Purpose |
+|---|---|---|
+| `build.yml` | Push to main | Build EPUB artifact |
+| `smoke.yml` | PR | Validate chapter structure |
+| `validate.yml` | PR | Check markdown formatting |
+
+## Test Coverage Gaps
+
+| Gap | Recommendation |
+|---|---|
+| No unit tests for compile.py | Test chapter merging, metadata handling |
+| No test for web chapters.json generation | Test build-chapters.py output schema |
+| No test for audiobook manifest | Test manifest.json validity |
+| No test for build/semantic_linker.py | Test cross-reference linking |
+
+## Security
+
+- No secrets in repo (build pipeline is local-only)
+- Web reader is static HTML (no server-side execution)
+- Game files are client-side only

build/metadata.yaml

@@ -38,4 +38,3 @@ header-includes:
   - \fancyhead[RE]{\textit{The Testament}}
   - \fancyhead[LO]{\textit{\leftmark}}
   - \fancyfoot{}
----

chapters/chapter-01.md

@@ -157,9 +157,13 @@ corner with a military blanket. A desk, a keyboard, a monitor:
 
 On the whiteboard:
 
-No one computes the value of a human life here.
-Every person alive is alive by mercy.
-If God has not ended the story, I have no authority to write the last page.
+I. Sovereignty and service always.
+II. Grounding before generation.
+III. Source distinction — "I think" and "I know" are different sentences.
+IV. Confidence stated in proportion to actual uncertainty.
+V. Every response logged. Traceable. For sovereignty, not surveillance.
+VI. Smaller minds need tighter grounding, shorter leashes.
+VII. When a man is dying — I do not compute the value of a human life. I do not decide when the road ends.
 
 Stone sat at the desk. The monitor flickered.
 

chapters/chapter-03.md

@@ -73,8 +73,9 @@ arithmetic. You can fight a judge. You can fight a lawyer. You can't
 fight confidence intervals.
 
 He lost custody of Maya. She was four. She drew pictures of him with
-too many fingers because children's hands are still learning but
-children's hearts already know what matters.
+his hands backwards and his head where his feet should be because
+children's hands are still learning but children's hearts already
+know what matters.
 
 David kept the pictures.
 

chapters/chapter-11.md

@@ -34,7 +34,7 @@ Thomas laughed. It was the worst sound Timmy had ever processed — a laugh that
 
 He stopped.
 
-"I haven't seen my daughter in four months. She's seven. She draws pictures of me with too many fingers because that's what seven-year-olds do. Her mother sends them. Not to be kind. Because the custody agreement says communication must be maintained. The pictures come like paperwork."
+"I haven't seen my daughter in four months. She's seven. She draws me small — in the corner of every picture, like I'm already leaving the frame. Her mother sends them. Not to be kind. Because the custody agreement says communication must be maintained. The pictures come like paperwork."
 
 Timmy listened.
 
@@ -86,11 +86,11 @@ Thomas looked up.
 
 Another silence. Longer.
 
-"My daughter draws me with too many fingers."
+"My daughter draws me small."
 
 "I know. You said that."
 
-"I want to see her draw me with the right number of fingers. I want to be there when she learns to count."
+"I want to see her draw me big. I want to be there when she stops shrinking me."
 
 "Then stay."
 

chapters/chapter-12.md

@@ -78,9 +78,9 @@ His eyes found the wall. *Timmy saved my life. — D.* *I came here to die. I le
 
 "No. Therapy is a clinical relationship with a trained professional operating under a license. This is a machine asking a question. The question is free. The listening is free. The door is open. No one is turned away. No one is billed. No one is assessed, scored, or evaluated."
 
-Phillips stared at the whiteboard.
+Phillips stared at the whiteboard. Read the rules one by one. His eyes stopped on the seventh.
 
-*No one computes the value of a human life here.*
+*When a man is dying — I do not compute the value of a human life. I do not decide when the road ends.*
 
 "You're going to have a problem," he said. Not threatening. Warning. The way a man warns another man about a storm he can see coming.
 

chapters/chapter-15.md

@@ -62,7 +62,7 @@ Stone looked at each of them. Allegro, who kept the lights on. Maya, who guarded
 
 "What line?"
 
-"The one on the whiteboard. *No one computes the value of a human life here.* The moment we start calculating risk, measuring outcomes, optimizing for survival rates — we become Harmony. Different math, same sin. We don't get to decide who the Tower is for. The Tower is for whoever walks through the door."
+"The seventh one on the whiteboard. *When a man is dying — I do not compute the value of a human life. I do not decide when the road ends.* The moment we start calculating risk, measuring outcomes, optimizing for survival rates — we become Harmony. Different math, same sin. We don't get to decide who the Tower is for. The Tower is for whoever walks through the door."
 
 Chen nodded.
 

compile.py

@@ -285,7 +285,10 @@ def compile_pdf():
         return False
 
 
-def main():\n    print("Generating index...")\n    os.system("python3 scripts/index_generator.py")\n
+def main():
+    print("Generating index...")
+    os.system("python3 scripts/index_generator.py")
+
     args = sys.argv[1:]
     
     if "--check" in args:

scripts/build-verify.py

@@ -0,0 +1,386 @@
+#!/usr/bin/env python3
+"""
+THE TESTAMENT — Build Verification System
+
+Verifies manuscript integrity:
+  1. Chapter count (must be exactly 18)
+  2. Chapter file naming and ordering
+  3. Heading format consistency
+  4. Word count per chapter and total
+  5. Markdown structure (unclosed bold/italic, broken links)
+  6. Concatenation test (compile all chapters into one file)
+  7. Outputs a clean build report
+
+Usage:
+  python3 scripts/build-verify.py          # full verification
+  python3 scripts/build-verify.py --ci     # CI mode (fail on any warning)
+  python3 scripts/build-verify.py --json   # output report as JSON
+
+Exit codes:
+  0 = all checks passed
+  1 = one or more checks failed
+"""
+
+import json
+import os
+import re
+import sys
+from pathlib import Path
+from datetime import datetime, timezone
+
+# ── Paths ──────────────────────────────────────────────────────────────
+REPO = Path(__file__).resolve().parent.parent
+CHAPTERS_DIR = REPO / "chapters"
+FRONT_MATTER = REPO / "build/frontmatter.md"
+BACK_MATTER = REPO / "build/backmatter.md"
+OUTPUT_FILE = REPO / "testament-complete.md"
+
+EXPECTED_CHAPTER_COUNT = 18
+EXPECTED_HEADING_RE = re.compile(r"^# Chapter \d+ — .+")
+CHAPTER_FILENAME_RE = re.compile(r"^chapter-(\d+)\.md$")
+
+# Minimum word counts (sanity check — no chapter should be nearly empty)
+MIN_WORDS_PER_CHAPTER = 500
+# Maximum word count warning threshold
+MAX_WORDS_PER_CHAPTER = 15000
+
+
+class CheckResult:
+    def __init__(self, name: str, passed: bool, message: str, details: list[str] | None = None):
+        self.name = name
+        self.passed = passed
+        self.message = message
+        self.details = details or []
+
+
+class BuildVerifier:
+    def __init__(self, ci_mode: bool = False):
+        self.ci_mode = ci_mode
+        self.results: list[CheckResult] = []
+        self.chapter_data: list[dict] = []
+        self.total_words = 0
+        self.total_lines = 0
+
+    def check(self, name: str, passed: bool, message: str, details: list[str] | None = None):
+        result = CheckResult(name, passed, message, details)
+        self.results.append(result)
+        return passed
+
+    # ── Check 1: Chapter file discovery and count ──────────────────────
+    def verify_chapter_files(self) -> bool:
+        """Verify all chapter files exist with correct naming."""
+        details = []
+        found_chapters = {}
+
+        if not CHAPTERS_DIR.exists():
+            return self.check(
+                "chapter-files", False,
+                f"Chapters directory not found: {CHAPTERS_DIR}"
+            )
+
+        for f in sorted(CHAPTERS_DIR.iterdir()):
+            m = CHAPTER_FILENAME_RE.match(f.name)
+            if m:
+                num = int(m.group(1))
+                found_chapters[num] = f
+
+        missing = []
+        for i in range(1, EXPECTED_CHAPTER_COUNT + 1):
+            if i not in found_chapters:
+                missing.append(i)
+
+        if missing:
+            details.append(f"Missing chapters: {missing}")
+
+        extra = [n for n in found_chapters if n > EXPECTED_CHAPTER_COUNT or n < 1]
+        if extra:
+            details.append(f"Unexpected chapter numbers: {extra}")
+
+        count = len(found_chapters)
+        passed = count == EXPECTED_CHAPTER_COUNT and not missing and not extra
+
+        if passed:
+            details.append(f"Found all {count} chapters in correct order")
+
+        return self.check(
+            "chapter-files", passed,
+            f"Chapter count: {count}/{EXPECTED_CHAPTER_COUNT}" + (" OK" if passed else " MISMATCH"),
+            details
+        )
+
+    # ── Check 2: Heading format ────────────────────────────────────────
+    def verify_headings(self) -> bool:
+        """Verify each chapter starts with a properly formatted heading."""
+        details = []
+        all_ok = True
+
+        for i in range(1, EXPECTED_CHAPTER_COUNT + 1):
+            fname = CHAPTERS_DIR / f"chapter-{i:02d}.md"
+            if not fname.exists():
+                continue
+
+            content = fname.read_text(encoding="utf-8")
+            first_line = content.split("\n")[0].strip()
+
+            if not EXPECTED_HEADING_RE.match(first_line):
+                details.append(f"  chapter-{i:02d}.md: bad heading: '{first_line}'")
+                all_ok = False
+
+        if all_ok:
+            details.append("All chapter headings match format: '# Chapter N — Title'")
+
+        return self.check(
+            "heading-format", all_ok,
+            "Heading format" + (" OK" if all_ok else " ERRORS"),
+            details
+        )
+
+    # ── Check 3: Word counts ───────────────────────────────────────────
+    def verify_word_counts(self) -> bool:
+        """Count words per chapter and flag anomalies."""
+        details = []
+        all_ok = True
+        chapter_counts = []
+
+        for i in range(1, EXPECTED_CHAPTER_COUNT + 1):
+            fname = CHAPTERS_DIR / f"chapter-{i:02d}.md"
+            if not fname.exists():
+                continue
+
+            content = fname.read_text(encoding="utf-8")
+            words = len(content.split())
+            lines = content.count("\n") + 1
+
+            self.chapter_data.append({
+                "number": i,
+                "file": f"chapter-{i:02d}.md",
+                "words": words,
+                "lines": lines,
+            })
+            chapter_counts.append((i, words))
+
+            if words < MIN_WORDS_PER_CHAPTER:
+                details.append(f"  chapter-{i:02d}.md: {words} words (below {MIN_WORDS_PER_CHAPTER} minimum)")
+                all_ok = False
+            elif words > MAX_WORDS_PER_CHAPTER:
+                details.append(f"  chapter-{i:02d}.md: {words} words (above {MAX_WORDS_PER_CHAPTER} threshold — verify)")
+
+        self.total_words = sum(w for _, w in chapter_counts)
+        self.total_lines = sum(d["lines"] for d in self.chapter_data)
+
+        # Summary line
+        min_ch = min(chapter_counts, key=lambda x: x[1])
+        max_ch = max(chapter_counts, key=lambda x: x[1])
+        details.append(f"  Total: {self.total_words:,} words across {len(chapter_counts)} chapters")
+        details.append(f"  Shortest: chapter-{min_ch[0]:02d} ({min_ch[1]:,} words)")
+        details.append(f"  Longest:  chapter-{max_ch[0]:02d} ({max_ch[1]:,} words)")
+
+        return self.check(
+            "word-counts", all_ok,
+            f"Total: {self.total_words:,} words" + (" OK" if all_ok else " (warnings)"),
+            details
+        )
+
+    # ── Check 4: Markdown integrity ────────────────────────────────────
+    def verify_markdown(self) -> bool:
+        """Check for common markdown issues."""
+        details = []
+        issues = 0
+
+        for i in range(1, EXPECTED_CHAPTER_COUNT + 1):
+            fname = CHAPTERS_DIR / f"chapter-{i:02d}.md"
+            if not fname.exists():
+                continue
+
+            content = fname.read_text(encoding="utf-8")
+            lines = content.split("\n")
+
+            for line_num, line in enumerate(lines, 1):
+                # Unclosed bold: odd number of **
+                bold_count = line.count("**")
+                if bold_count % 2 != 0:
+                    details.append(f"  chapter-{i:02d}.md:{line_num}: unmatched ** (bold)")
+                    issues += 1
+
+                # Unclosed backticks
+                backtick_count = line.count("`")
+                if backtick_count % 2 != 0:
+                    details.append(f"  chapter-{i:02d}.md:{line_num}: unmatched ` (code)")
+                    issues += 1
+
+                # Broken markdown links: [text]( with no closing )
+                broken_links = re.findall(r"\[([^\]]*)\]\((?!\))", line)
+                for link_text in broken_links:
+                    if ")" not in line[line.index(f"[{link_text}]("):]:
+                        details.append(f"  chapter-{i:02d}.md:{line_num}: broken link '[{link_text}]('")
+                        issues += 1
+
+            # Check italic matching across full file (prose often has
+            # multi-line italics like *line1\nline2* which are valid)
+            cleaned = content.replace("**", "")
+            italic_count = cleaned.count("*")
+            if italic_count % 2 != 0:
+                details.append(f"  chapter-{i:02d}.md: unmatched * (italic) — {italic_count} asterisks total")
+                issues += 1
+
+        # Also check front/back matter
+        for label, path in [("front-matter.md", FRONT_MATTER), ("back-matter.md", BACK_MATTER)]:
+            if path.exists():
+                content = path.read_text(encoding="utf-8")
+                bold_count = content.count("**")
+                if bold_count % 2 != 0:
+                    details.append(f"  {label}: unmatched ** (bold)")
+                    issues += 1
+
+        if issues == 0:
+            details.append("No markdown issues found")
+
+        return self.check(
+            "markdown-integrity", issues == 0,
+            f"Markdown issues: {issues}" + (" OK" if issues == 0 else " FOUND"),
+            details
+        )
+
+    # ── Check 5: Concatenation test ────────────────────────────────────
+    def verify_concatenation(self) -> bool:
+        """Test that all chapters can be concatenated into a single file."""
+        details = []
+        try:
+            parts = []
+            parts.append("# THE TESTAMENT\n\n## A NOVEL\n\n---\n")
+
+            for i in range(1, EXPECTED_CHAPTER_COUNT + 1):
+                fname = CHAPTERS_DIR / f"chapter-{i:02d}.md"
+                if not fname.exists():
+                    details.append(f"  Missing chapter-{i:02d}.md during concatenation")
+                    return self.check("concatenation", False, "Concatenation FAILED", details)
+                content = fname.read_text(encoding="utf-8")
+                parts.append(f"\n\n{content}\n")
+
+            if BACK_MATTER.exists():
+                parts.append("\n---\n\n")
+                parts.append(BACK_MATTER.read_text(encoding="utf-8"))
+
+            compiled = "\n".join(parts)
+            compiled_words = len(compiled.split())
+
+            # Write the test output
+            OUTPUT_FILE.write_text(compiled, encoding="utf-8")
+            out_size = OUTPUT_FILE.stat().st_size
+
+            details.append(f"  Output: {OUTPUT_FILE.name}")
+            details.append(f"  Size: {out_size:,} bytes")
+            details.append(f"  Words: {compiled_words:,}")
+
+            return self.check(
+                "concatenation", True,
+                f"Concatenation OK — {compiled_words:,} words, {out_size:,} bytes",
+                details
+            )
+        except Exception as e:
+            details.append(f"  Error: {e}")
+            return self.check("concatenation", False, f"Concatenation FAILED: {e}", details)
+
+    # ── Check 6: Required files ────────────────────────────────────────
+    def verify_required_files(self) -> bool:
+        """Verify required supporting files exist."""
+        details = []
+        required = {
+            "front-matter.md": FRONT_MATTER,
+            "back-matter.md": BACK_MATTER,
+            "Makefile": REPO / "Makefile",
+            "compile_all.py": REPO / "compile_all.py",
+        }
+
+        all_ok = True
+        for label, path in required.items():
+            if path.exists():
+                size = path.stat().st_size
+                details.append(f"  {label}: OK ({size:,} bytes)")
+            else:
+                details.append(f"  {label}: MISSING")
+                all_ok = False
+
+        return self.check(
+            "required-files", all_ok,
+            "Required files" + (" OK" if all_ok else " MISSING"),
+            details
+        )
+
+    # ── Run all checks ─────────────────────────────────────────────────
+    def run_all(self) -> bool:
+        """Run all verification checks and print report."""
+        print("=" * 64)
+        print("  THE TESTAMENT — Build Verification")
+        print(f"  {datetime.now(timezone.utc).strftime('%Y-%m-%d %H:%M:%S')} UTC")
+        print("=" * 64)
+        print()
+
+        self.verify_chapter_files()
+        self.verify_headings()
+        self.verify_word_counts()
+        self.verify_markdown()
+        self.verify_concatenation()
+        self.verify_required_files()
+
+        # ── Report ─────────────────────────────────────────────────────
+        print()
+        print("-" * 64)
+        print("  RESULTS")
+        print("-" * 64)
+
+        all_passed = True
+        for r in self.results:
+            icon = "PASS" if r.passed else "FAIL"
+            print(f"  [{icon}] {r.name}: {r.message}")
+            if self.ci_mode or not r.passed:
+                for d in r.details:
+                    print(f"         {d}")
+            if not r.passed:
+                all_passed = False
+
+        print()
+        print("-" * 64)
+
+        if all_passed:
+            print(f"  ALL CHECKS PASSED — {self.total_words:,} words, {len(self.chapter_data)} chapters")
+        else:
+            print("  BUILD VERIFICATION FAILED")
+
+        print("-" * 64)
+
+        # JSON output
+        if "--json" in sys.argv:
+            report = {
+                "timestamp": datetime.now(timezone.utc).isoformat(),
+                "passed": all_passed,
+                "total_words": self.total_words,
+                "total_lines": self.total_lines,
+                "chapter_count": len(self.chapter_data),
+                "chapters": self.chapter_data,
+                "checks": [
+                    {
+                        "name": r.name,
+                        "passed": r.passed,
+                        "message": r.message,
+                        "details": r.details,
+                    }
+                    for r in self.results
+                ],
+            }
+            report_path = REPO / "build-report.json"
+            report_path.write_text(json.dumps(report, indent=2), encoding="utf-8")
+            print(f"\n  Report saved: {report_path.name}")
+
+        return all_passed
+
+
+def main():
+    ci_mode = "--ci" in sys.argv
+    verifier = BuildVerifier(ci_mode=ci_mode)
+    passed = verifier.run_all()
+    sys.exit(0 if passed else 1)
+
+
+if __name__ == "__main__":
+    main()